Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2274
(446 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 25 0.25
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 24 0.57
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 23 0.99
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 1.3
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 1.7
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 3.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 3.0
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 21 7.0
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 7.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.3
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 25.4 bits (53), Expect = 0.25
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 1 LNFNIKKLICDWPL*LSNCPLV 66
L F+I++ CDW ++NC ++
Sbjct: 78 LAFDIERQTCDWKTKVNNCDVI 99
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 24.2 bits (50), Expect = 0.57
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 1 LNFNIKKLICDWPL*LSNCPL 63
L F+I K CDW + NC L
Sbjct: 79 LYFDIDKQTCDWKDSVKNCKL 99
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 23.4 bits (48), Expect = 0.99
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 1 LNFNIKKLICDWPL*LSNC 57
L F+I K CDW ++NC
Sbjct: 71 LAFDIDKQTCDWKGKVNNC 89
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 1.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 1 LNFNIKKLICDWP 39
L++N ++ ICDWP
Sbjct: 1135 LHWNKERKICDWP 1147
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 1 LNFNIKKLICDWP 39
L+++ K ICDWP
Sbjct: 1311 LHWDNNKNICDWP 1323
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 22.6 bits (46), Expect = 1.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 1 LNFNIKKLICDWPL*LSNC 57
L FN + +CDWP + C
Sbjct: 951 LVFNPDQNVCDWPENVEGC 969
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 3.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 425 LTVYTTYNIPNAIQYINAESNLL*INKKL 339
+T YT ++ + + E+N L INK+L
Sbjct: 62 ITSYTLLSVYSLFRIATNENNSLVINKRL 90
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 3.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 425 LTVYTTYNIPNAIQYINAESNLL*INKKL 339
+T YT ++ + + E+N L INK+L
Sbjct: 62 ITSYTLLSVYSLFRIATNENNSLVINKRL 90
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 287 RRTAEVALLSRAPSCRRIIF 346
+R+ V++L +AP+ R +IF
Sbjct: 396 KRSKLVSILEKAPNERTLIF 415
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 20.6 bits (41), Expect = 7.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 7 FNIKKLICDWP 39
F+ + ICDWP
Sbjct: 510 FHTQSNICDWP 520
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 210 VRETLCFLTLGLPKFVSFLSSCNESVAS*ILLSTRLKKFHFKNMD 76
V ETL ++ +P ++ + VAS ++L+ + +H + D
Sbjct: 260 VAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTAD 304
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 210 VRETLCFLTLGLPKFVSFLSSCNESVAS*ILLSTRLKKFHFKNMD 76
V ETL ++ +P ++ + VAS ++L+ + +H + D
Sbjct: 260 VAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTAD 304
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 210 VRETLCFLTLGLPKFVSFLSSCNESVAS*ILLSTRLKKFHFKNMD 76
V ETL ++ +P ++ + VAS ++L+ + +H + D
Sbjct: 260 VAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNYHHRTAD 304
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,163
Number of Sequences: 336
Number of extensions: 1920
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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