Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2274
         (446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003307-1|AAO25067.1|  661|Drosophila melanogaster GH08772p pro...    28   6.6  
AE014134-2081|AAN10783.1|  359|Drosophila melanogaster CG6541-PB...    28   6.6  
AE014134-2080|AAF53107.1|  359|Drosophila melanogaster CG6541-PA...    28   6.6  

>BT003307-1|AAO25067.1|  661|Drosophila melanogaster GH08772p
           protein.
          Length = 661

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +1

Query: 154 EKRYELRKTQSEKTKRLANPSTVEREQGQSELGCFSYTKHS 276
           EK   ++ +   +TK +  P+T  ++  Q  +  FS T H+
Sbjct: 557 EKSNNIKASSKTETKPVQKPTTKSQQPSQKSVAAFSKTTHT 597


>AE014134-2081|AAN10783.1|  359|Drosophila melanogaster CG6541-PB,
           isoform B protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 167 NLGRPRVRKQSVSRTPRPWRESKDKAS*VVSLIQS 271
           N+ RPR +   VSR   P RE K K S    + +S
Sbjct: 275 NVSRPRRQNTKVSRVDAPKREKKRKTSQFTQISES 309


>AE014134-2080|AAF53107.1|  359|Drosophila melanogaster CG6541-PA,
           isoform A protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 167 NLGRPRVRKQSVSRTPRPWRESKDKAS*VVSLIQS 271
           N+ RPR +   VSR   P RE K K S    + +S
Sbjct: 275 NVSRPRRQNTKVSRVDAPKREKKRKTSQFTQISES 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,577,271
Number of Sequences: 53049
Number of extensions: 314517
Number of successful extensions: 696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)