Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2272
         (471 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    31   0.015
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.062
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    27   0.44 
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        25   1.8  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   1.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   1.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   1.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   3.1  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      23   4.1  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    22   9.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    22   9.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    22   9.4  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 31.5 bits (68), Expect = 0.015
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 244 TPQKGEWSTLGGGKWVPIGGHPNNVGGSDECGQLS 348
           T ++G  S++ GG W P+GG   N  GS      S
Sbjct: 729 TMREGRCSSVSGGDWSPMGGDQQNSNGSSSTASSS 763


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.062
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = +2

Query: 80  IQSGTTVSTVGPATGPMPRPHLYK--PEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPK 253
           +  G     VGP   PMP        P +  R  F   P+G PQ  +  +G D +   P 
Sbjct: 286 LSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPP 345

Query: 254 RGSGPPS 274
             S  PS
Sbjct: 346 PSSATPS 352


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 445  GATKGATGTPGYGKIVGLIG 386
            G+  G  GTPG GK  G+IG
Sbjct: 2057 GSISGGGGTPGGGKSKGIIG 2076


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 113 PATGPMPRPHLYKP 154
           PATG + +PH Y+P
Sbjct: 29  PATGGVKKPHRYRP 42


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 335 HSSLPPTLLGCPPMGTHFPP 276
           H+ LPP     P  G H PP
Sbjct: 732 HADLPPVPPNFPRCGNHIPP 751


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 335 HSSLPPTLLGCPPMGTHFPP 276
           H+ LPP     P  G H PP
Sbjct: 732 HADLPPVPPNFPTCGDHLPP 751


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 353 MGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSP 255
           MG+  P   +P   +G PPMG    PP +  +P
Sbjct: 114 MGMRPPPMMVPT--MGMPPMGLGMRPPVMSAAP 144


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -3

Query: 340 VHTRHFPPHCWGAPLWGPIFHPRGWTTPPFGECLKSVPPRNGLP 209
           ++T HFP H   + L+ P+      T P F        P+  LP
Sbjct: 516 LYTAHFPTHLLPSSLYPPV-SSESTTAPIFHTHFLGYQPQMQLP 558


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 119 TGPMPRPHLYKPEEEPRHWFGAHPLGAP 202
           TG M  P   +   +P H    HP+G P
Sbjct: 171 TGLMQAPSQQQQHLQPVHPLAFHPIGGP 198


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 113 PATGPMPRPHLYKP 154
           P+TG + +PH Y+P
Sbjct: 31  PSTGGVKKPHRYRP 44


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 308 GCPPMGTHFPPPRVDH 261
           GC   G H+ P +V H
Sbjct: 75  GCASTGGHYNPDKVSH 90


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 119 TGPMPRPHLYKPEEEPRHW 175
           +GP+ + HLY P  E   W
Sbjct: 548 SGPIYKNHLYMPNRERVLW 566


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 119 TGPMPRPHLYKPEEEPRHW 175
           +GP+ + HLY P  E   W
Sbjct: 548 SGPIYKNHLYMPNRERVLW 566


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,039
Number of Sequences: 2352
Number of extensions: 14252
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)