Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2272
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 31 0.32
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 31 0.32
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 31 0.32
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 31 0.32
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 0.73
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 1.3
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 1.7
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 1.7
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 2.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical ... 28 2.9
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 28 2.9
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 27 5.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 5.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 5.1
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 27 5.1
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 27 5.1
AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical ... 27 5.1
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 27 5.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 27 5.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 27 5.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 27 5.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 27 5.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 27 5.1
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 27 6.8
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 27 6.8
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 27 6.8
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 27 6.8
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 27 6.8
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 27 6.8
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 27 6.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 27 6.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 27 6.8
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 9.0
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 9.0
AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical ... 27 9.0
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 386 SDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSP 207
+D G + P + S+PPT P + PP +P S V P+P+ ++P
Sbjct: 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAP--SEVPPTPKSAAP----SEVPPTPKSAAP 342
Query: 206 SGEPLAGERQTSAAAPP 156
S PL + ++ PP
Sbjct: 343 SEVPLTPKSAAQSSVPP 359
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 386 SDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSP 207
+D G + P + S+PPT P + PP +P S V P+P+ ++P
Sbjct: 239 ADAGSEVPPTPKTAASEKQSVPPTPKSAAP--SEVPPTPKSAAP----SEVPPTPKSAAP 292
Query: 206 SGEPLAGERQTSAAAPP 156
S PL + ++ PP
Sbjct: 293 SEVPLTPKSAAQSSVPP 309
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 386 SDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSP 207
+D G + P + S+PPT P + PP +P S V P+P+ ++P
Sbjct: 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAP--SEVPPTPKSAAP----SEVPPTPKSAAP 342
Query: 206 SGEPLAGERQTSAAAPP 156
S PL + ++ PP
Sbjct: 343 SEVPLTPKSAAQSSVPP 359
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 31.5 bits (68), Expect = 0.32
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 386 SDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSP 207
+D G + P + S+PPT P + PP +P S V P+P+ ++P
Sbjct: 289 ADAGSEVPPTPKTAASEKQSVPPTPKSAAP--SEVPPTPKSAAP----SEVPPTPKSAAP 342
Query: 206 SGEPLAGERQTSAAAPP 156
S PL + ++ PP
Sbjct: 343 SEVPLTPKSAAQSSVPP 359
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 0.73
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 338 PHSSLPPTLLGCPPMGTHFPPP 273
P+ PP LLG PM T+ PPP
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPP 522
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = -2
Query: 338 PHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQT 174
P PPT PP PPP SP +P+RS P+G P G T
Sbjct: 302 PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 356
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVE 283
T P TG P P P G+ P G P + K A DR P GS P
Sbjct: 413 TGSPPTGSPPTGR--PPRGSPPT--GSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPH 468
Query: 284 NGSP 295
G P
Sbjct: 469 RGGP 472
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQR--SSPSGEPLAGERQTSAAAPP 156
PP PP T PPP SP + P P R S P P G T + PP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 27.5 bits (58), Expect = 5.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEE-------PRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGS 262
T P TG PR K EE PR P G P+K + R + R S
Sbjct: 351 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 410
Query: 263 GPPSGVENGSP*GGTP 310
P GSP G P
Sbjct: 411 PPTGSPPTGSPPTGRP 426
Score = 26.6 bits (56), Expect = 9.0
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGT-HFPPPRVDHSPFWGVS*VGP-SPQRSSPSGEPLAGERQTSAAAPP 156
PPT G PP G H P S S GP P+RS P+G P G T APP
Sbjct: 457 PPT--GSPPTGRPHRGGPGKSES---SESREGPRGPRRSPPTGSPPTGSPPT--GAPP 507
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = -2
Query: 338 PHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQT 174
P PPT PP PPP SP +P+RS P+G P G T
Sbjct: 323 PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 377
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVE 283
T P TG P P P G+ P G P + K A DR P GS P
Sbjct: 434 TGSPPTGSPPTGR--PPRGSPPT--GSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPH 489
Query: 284 NGSP 295
G P
Sbjct: 490 RGGP 493
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQR--SSPSGEPLAGERQTSAAAPP 156
PP PP T PPP SP + P P R S P P G T + PP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 27.5 bits (58), Expect = 5.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEE-------PRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGS 262
T P TG PR K EE PR P G P+K + R + R S
Sbjct: 372 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 431
Query: 263 GPPSGVENGSP*GGTP 310
P GSP G P
Sbjct: 432 PPTGSPPTGSPPTGRP 447
Score = 26.6 bits (56), Expect = 9.0
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGT-HFPPPRVDHSPFWGVS*VGP-SPQRSSPSGEPLAGERQTSAAAPP 156
PPT G PP G H P S S GP P+RS P+G P G T APP
Sbjct: 478 PPT--GSPPTGRPHRGGPGKSES---SESREGPRGPRRSPPTGSPPTGSPPT--GAPP 528
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = -2
Query: 338 PHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQT 174
P PPT PP PPP SP +P+RS P+G P G T
Sbjct: 308 PPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPT 362
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/64 (32%), Positives = 23/64 (35%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVE 283
T P TG P P P G+ P G P + K A DR P GS P
Sbjct: 419 TGSPPTGSPPTGR--PPRGSPPT--GSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPH 474
Query: 284 NGSP 295
G P
Sbjct: 475 RGGP 478
Score = 27.5 bits (58), Expect = 5.1
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQR--SSPSGEPLAGERQTSAAAPP 156
PP PP T PPP SP + P P R S P P G T + PP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 27.5 bits (58), Expect = 5.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Frame = +2
Query: 104 TVGPATGPMPRPHLYKPEEE-------PRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGS 262
T P TG PR K EE PR P G P+K + R + R S
Sbjct: 357 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 416
Query: 263 GPPSGVENGSP*GGTP 310
P GSP G P
Sbjct: 417 PPTGSPPTGSPPTGRP 432
Score = 26.6 bits (56), Expect = 9.0
Identities = 24/58 (41%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -2
Query: 323 PPTLLGCPPMGT-HFPPPRVDHSPFWGVS*VGP-SPQRSSPSGEPLAGERQTSAAAPP 156
PPT G PP G H P S S GP P+RS P+G P G T APP
Sbjct: 463 PPT--GSPPTGRPHRGGPGKSES---SESREGPRGPRRSPPTGSPPTGSPPT--GAPP 513
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = -2
Query: 404 DSRLNRSDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFW-GVS*VGP 228
D + + GV MS + + P + P L+ PP+ P P V P G
Sbjct: 1129 DHAIEQIKNGVKTMSQTLDIKLPSADPLPNLVKPPPVQVVAPSPSVIPPPILPPPPPAGV 1188
Query: 227 SPQRSSPSG----EPLAGERQTSAAAP 159
Q+ +P G P+A E +AAAP
Sbjct: 1189 IGQQRNPIGGARQVPVAAEAPAAAAAP 1215
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 29.1 bits (62), Expect = 1.7
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = -2
Query: 404 DSRLNRSDMGVLIMSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFW-GVS*VGP 228
D + + GV MS + + P + P L+ PP+ P P V P G
Sbjct: 1129 DHAIEQIKNGVKTMSQTLDIKLPSADPLPNLVKPPPVQVVAPSPSVIPPPILPPPPPAGV 1188
Query: 227 SPQRSSPSG----EPLAGERQTSAAAP 159
Q+ +P G P+A E +AAAP
Sbjct: 1189 IGQQRNPIGGARQVPVAAEAPAAAAAP 1215
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +2
Query: 74 QYIQSGTTVSTVGPATGPMPRPHLYKPEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPK 253
Q I G +T P M P+ P PRH G +PQ G + G +T P+
Sbjct: 651 QLILQGAKKTTSTPMVSRMASPN---PMASPRHSSGGMTPRSPQDGMSSRGSSGGQT-PR 706
Query: 254 RGSGPPSGVENGS 292
+G G G G+
Sbjct: 707 QGGGGGRGGHFGT 719
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +2
Query: 74 QYIQSGTTVSTVGPATGPMPRPHLYKPEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPK 253
Q I G +T P M P+ P PRH G +PQ G + G +T P+
Sbjct: 651 QLILQGAKKTTSTPMVSRMASPN---PMASPRHSSGGMTPRSPQDGMSSRGSSGGQT-PR 706
Query: 254 RGSGPPSGVENGS 292
+G G G G+
Sbjct: 707 QGGGGGRGGHFGT 719
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 113 PATGPMPRPHLYKPEEEPRHWFGA-HPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVENG 289
P +GP Y P ++ + FGA P GAPQ+G + P +G GPP G
Sbjct: 297 PPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQG-----PPQG-GPPQGSFGA 350
Query: 290 SP 295
P
Sbjct: 351 PP 352
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 311 LGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRS-SPSGEPLAGERQTSAAAPP 156
L C P T+ P D +PF G +P+ S SP G PLAG R A P
Sbjct: 348 LDCVPC-TYLQPQYSDWNPFLG----DQTPRGSQSPVGTPLAGHRTKRAGCLP 395
>Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical
protein C31G12.2 protein.
Length = 195
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +1
Query: 259 EW---STLGGGKWVPIGGHPNNVGGSDEC 336
EW ST G W+ G PNN GG + C
Sbjct: 137 EWTDGSTTGTDGWIWRSGEPNNAGGLEIC 165
>AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical
protein Y51A2A.6 protein.
Length = 140
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 345 QSHGGTHYEHSHITPIKPTILPYPGVPVAP 434
+ HG H+ H+H P +P P PV P
Sbjct: 48 KKHGHGHHHHNHGRPSRPRPTRPPRAPVCP 77
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 287 HFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQTSAAAP 159
H PPP +P G G +PQ + + + Q S A P
Sbjct: 92 HAPPPPASSAPIVGAPRQGATPQAAPATTPATTSQHQQSIATP 134
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -2
Query: 323 PPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQTS 171
PPT PP T PPP + V+ V ++P+ P A E T+
Sbjct: 193 PPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAPENTTA 243
>Z70279-6|CAA94244.2| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 86 SGTTVSTVGPATGPMPRPHLYKPEEEPR---HWFGAHPLGAPQK 208
+GT+ PA P L+ P++ PR H F HP +P++
Sbjct: 337 AGTSSQPTSPAAEVYPNVLLFNPQKFPRNCVHPFTTHPYYSPKE 380
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical
protein K03H1.2 protein.
Length = 1131
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 316 VGGSDECGQLSPMGALIMSTPISLRLSRL 402
+G D GQL+PMG ++ P+ LS++
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKM 868
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 359 APMGLSCPHSSLPPTLLGCPPMGTHFPPP 273
AP+ + P PP +G P +G PPP
Sbjct: 623 APISSAAPPPPPPPPPMGLPAVGAGAPPP 651
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 359 APMGLSCPHSSLPPTLLGCPPMGTHFPPP 273
AP+ + P PP +G P +G PPP
Sbjct: 449 APISSAAPPPPPPPPPMGLPAVGAGAPPP 477
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 299 GGTPTMWGEVTSVDSSVPWGHSL*ALP 379
GGTPT W + T+ S VP H+ A P
Sbjct: 386 GGTPTWWIDDTTSTSLVPAVHTTTAYP 412
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 299 GGTPTMWGEVTSVDSSVPWGHSL*ALP 379
GGTPT W + T+ S VP H+ A P
Sbjct: 355 GGTPTWWIDDTTSTSLVPAVHTTTAYP 381
>AL023841-4|CAC42359.1| 720|Caenorhabditis elegans Hypothetical
protein K11E8.1c protein.
Length = 720
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 86 SGTTVSTVGPATGPMPRPHLYKPEEEPR---HWFGAHPLGAPQK 208
+GT+ PA P L+ P++ PR H F HP +P++
Sbjct: 337 AGTSSQPTSPAAEVYPNVLLFNPQKFPRNCVHPFTTHPYYSPKE 380
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex
determination protein MOG-1 protein.
Length = 1131
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 316 VGGSDECGQLSPMGALIMSTPISLRLSRL 402
+G D GQL+PMG ++ P+ LS++
Sbjct: 840 LGALDNTGQLTPMGRKMVEFPLDPTLSKM 868
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 27.5 bits (58), Expect = 5.1
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -2
Query: 365 MSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAG 186
M P+G+ P +PP +G PPP +S +GP P PS P
Sbjct: 93 MPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP---------MSLLGPPPFSVPPSVPP--- 140
Query: 185 ERQTSAAAPPLV 150
TS+AA P+V
Sbjct: 141 --PTSSAAAPIV 150
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 27.5 bits (58), Expect = 5.1
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -2
Query: 365 MSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAG 186
M P+G+ P +PP +G PPP +S +GP P PS P
Sbjct: 116 MPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP---------MSLLGPPPFSVPPSVPP--- 163
Query: 185 ERQTSAAAPPLV 150
TS+AA P+V
Sbjct: 164 --PTSSAAAPIV 173
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 27.5 bits (58), Expect = 5.1
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = -2
Query: 365 MSAPMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAG 186
M P+G+ P +PP +G PPP +S +GP P PS P
Sbjct: 366 MPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP---------MSLLGPPPFSVPPSVPP--- 413
Query: 185 ERQTSAAAPPLV 150
TS+AA P+V
Sbjct: 414 --PTSSAAAPIV 423
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.5 bits (58), Expect = 5.1
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = -2
Query: 356 PMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQ 177
P+ LS P + PT PP T PPP + SP P P S P G PL E+Q
Sbjct: 79 PLPLSNPPAK--PTPPPPPPKPTIRPPP-IPASP-------PPRPPASEPVGIPLYSEKQ 128
Query: 176 -------TSAAAPP 156
T+A +PP
Sbjct: 129 HQQQLRPTTAVSPP 142
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.5 bits (58), Expect = 5.1
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = -2
Query: 356 PMGLSCPHSSLPPTLLGCPPMGTHFPPPRVDHSPFWGVS*VGPSPQRSSPSGEPLAGERQ 177
P+ LS P + PT PP T PPP + SP P P S P G PL E+Q
Sbjct: 301 PLPLSNPPAK--PTPPPPPPKPTIRPPP-IPASP-------PPRPPASEPVGIPLYSEKQ 350
Query: 176 -------TSAAAPP 156
T+A +PP
Sbjct: 351 HQQQLRPTTAVSPP 364
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
protein F55B11.1 protein.
Length = 1358
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 357 GTHYEHSHITPI--KPTILPYPGVPVAPLVAPDHQVV*RA 470
G H TP+ K TI + G P+A +VA DH++ +A
Sbjct: 665 GAQMGHHSDTPVFVKETIT-FHGQPIAAIVATDHEIARKA 703
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/66 (31%), Positives = 26/66 (39%)
Frame = +2
Query: 152 PEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVENGSP*GGTPTMWGEVT 331
P+ PR F P PQ+ KT + T P +G P V GS P +
Sbjct: 208 PKLHPRSPFPPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVP-GSKGPPVPPKPSKEN 266
Query: 332 SVDSSV 349
S D SV
Sbjct: 267 SNDKSV 272
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +1
Query: 157 GGAAALVWRSPARGSPEGEDRCGEGPT*DTPQKGEWSTLGGGKWVPIGG----HPNNVGG 324
GGA+A + +PA G P G G P + LGGG P G + V G
Sbjct: 41 GGASAAAYAAPAAGYP--RPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHG 98
Query: 325 SDECGQLSPMGA 360
+ G GA
Sbjct: 99 GAQGGYAGAQGA 110
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +1
Query: 157 GGAAALVWRSPARGSPEGEDRCGEGPT*DTPQKGEWSTLGGGKWVPIGG----HPNNVGG 324
GGA+A + +PA G P G G P + LGGG P G + V G
Sbjct: 41 GGASAAAYAAPAAGYP--RPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHG 98
Query: 325 SDECGQLSPMGA 360
+ G GA
Sbjct: 99 GAQGGYAGAQGA 110
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Frame = +1
Query: 157 GGAAALVWRSPARGSPEGEDRCGEGPT*DTPQKGEWSTLGGGKWVPIGG----HPNNVGG 324
GGA+A + +PA G P G G P + LGGG P G + V G
Sbjct: 41 GGASAAAYAAPAAGYP--RPPIGYGAPPPPPPPPAFGGLGGGAAYPGAGAGGQYDTGVHG 98
Query: 325 SDECGQLSPMGA 360
+ G GA
Sbjct: 99 GAQGGYAGAQGA 110
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/66 (31%), Positives = 26/66 (39%)
Frame = +2
Query: 152 PEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVENGSP*GGTPTMWGEVT 331
P+ PR F P PQ+ KT + T P +G P V GS P +
Sbjct: 208 PKLHPRSPFPPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVP-GSKGPPVPPKPSKEN 266
Query: 332 SVDSSV 349
S D SV
Sbjct: 267 SNDKSV 272
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.1 bits (57), Expect = 6.8
Identities = 21/66 (31%), Positives = 26/66 (39%)
Frame = +2
Query: 152 PEEEPRHWFGAHPLGAPQKGKTVAGRDRLKTLPKRGSGPPSGVENGSP*GGTPTMWGEVT 331
P+ PR F P PQ+ KT + T P +G P V GS P +
Sbjct: 208 PKLHPRSPFPPQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVP-GSKGPPVPPKPSKEN 266
Query: 332 SVDSSV 349
S D SV
Sbjct: 267 SNDKSV 272
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 351 GTELSTLVTSPHIVGVPPYGDPFST 277
G E+ V SPHIV PY D ST
Sbjct: 206 GGEIVYKVISPHIVTENPYADEIST 230
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 322 PPHCWGAPLWGPIFHPRGWTTPPFGECLKSVPPRNGLP 209
P H +G P P+ HP PPFG PPR P
Sbjct: 272 PHHPYGPP--HPMHHPYAMMPPPFG--FFPPPPRGHFP 305
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 322 PPHCWGAPLWGPIFHPRGWTTPPFGECLKSVPPRNGLP 209
P H +G P P+ HP PPFG PPR P
Sbjct: 272 PHHPYGPP--HPMHHPYAMMPPPFG--FFPPPPRGHFP 305
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 384 TPIKPTILPYPGVPVAPLVAPDHQVV 461
T ++PT++P P P+ P +P Q +
Sbjct: 29 TVLQPTVIPMPAPPMKPAPSPAFQAM 54
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 384 TPIKPTILPYPGVPVAPLVAPDHQVV 461
T ++PT++P P P+ P +P Q +
Sbjct: 29 TVLQPTVIPMPAPPMKPAPSPAFQAM 54
>AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical
protein B0205.8 protein.
Length = 120
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 7/44 (15%)
Frame = +1
Query: 241 DTPQKGEWSTLGGGK-------WVPIGGHPNNVGGSDECGQLSP 351
D +G W GGG+ W GGH G D GQ P
Sbjct: 65 DNSNRGGWVPRGGGQRGGYRGGWQDRGGHRGGGGWQDRGGQRQP 108
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 384 TPIKPTILPYPGVPVAPLVAPDHQVV 461
T ++PT++P P P+ P +P Q +
Sbjct: 56 TVLQPTVIPMPAPPMKPAPSPAFQAM 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,435,305
Number of Sequences: 27780
Number of extensions: 329790
Number of successful extensions: 1131
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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