Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2270
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 155 3e-38
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 154 4e-38
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 154 4e-38
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 154 5e-38
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 152 1e-37
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 149 1e-36
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 148 3e-36
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 146 9e-36
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 137 6e-33
12_02_1282 + 27528159-27529148,27529549-27529614 77 6e-15
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 69 3e-12
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 67 7e-12
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 64 5e-11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 58 3e-09
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 50 8e-07
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 48 3e-06
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 46 2e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 45 3e-05
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 30 1.3
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 1.7
11_06_0126 - 20378611-20379719,20380081-20381239 29 2.2
08_02_0238 + 14665813-14668798,14669088-14669125 29 2.2
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 2.2
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 29 2.2
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 29 3.0
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 28 3.9
02_05_0615 - 30364956-30365729,30365813-30366286 28 5.2
09_02_0456 - 9525067-9525422,9525679-9528226 27 6.8
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 27 9.0
11_06_0094 - 20007535-20007658,20007759-20008367,20009021-200090... 27 9.0
07_03_0463 - 18449908-18450171,18450718-18450810,18451170-184512... 27 9.0
03_06_0303 - 32994697-32994831,32994959-32995096,32995205-329952... 27 9.0
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 155 bits (375), Expect = 3e-38
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 297 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 356
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGPSIVHRKCF
Sbjct: 357 SKGEYDESGPSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 154 bits (374), Expect = 4e-38
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGP+IVHRKCF
Sbjct: 360 SKDEYDESGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 154 bits (374), Expect = 4e-38
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGP+IVHRKCF
Sbjct: 360 SKDEYDESGPAIVHRKCF 377
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 154 bits (373), Expect = 5e-38
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 338 SKQEYDESGPSIVHRKCF 285
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 152 bits (369), Expect = 1e-37
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 303 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 362
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGP+IVHRKCF
Sbjct: 363 SKAEYDESGPAIVHRKCF 380
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 149 bits (362), Expect = 1e-36
Identities = 67/78 (85%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 338 SKQEYDESGPSIVHRKCF 285
S+ EY+ESGP+IVHRKCF
Sbjct: 360 SRAEYEESGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 148 bits (358), Expect = 3e-36
Identities = 67/78 (85%), Positives = 73/78 (93%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGG+TM+PGIA RM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGP IVH KCF
Sbjct: 359 SKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 146 bits (354), Expect = 9e-36
Identities = 66/78 (84%), Positives = 71/78 (91%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGG+TM+PGI RM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SK EYDESGP IVH KCF
Sbjct: 359 SKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 137 bits (331), Expect = 6e-33
Identities = 69/92 (75%), Positives = 75/92 (81%), Gaps = 14/92 (15%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ---- 351
VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNL 359
Query: 350 ----------QMWISKQEYDESGPSIVHRKCF 285
QMWISK EYDESGP+IVHRKCF
Sbjct: 360 TPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 77.4 bits (182), Expect = 6e-15
Identities = 46/78 (58%), Positives = 49/78 (62%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTM+PGIA RM KEITALAPS+MKIK MWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIK--------------------------MWI 333
Query: 338 SKQEYDESGPSIVHRKCF 285
+K EYDESGPSIVHRKCF
Sbjct: 334 AKAEYDESGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLST 357
+L GGT G R Q+E L+ S + ++ PPE +YS W+GG+ILA +
Sbjct: 316 MLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVF 374
Query: 356 FQQMWISKQEYDESGPSIVHRKCF 285
Q ++K +YDE+GPSIVH+KCF
Sbjct: 375 PQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 67.3 bits (157), Expect = 7e-12
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
+L+GG+T++P R++KE+ L P ++KIIA + W GGS+LA F+ M I
Sbjct: 351 ILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCI 410
Query: 338 SKQEYDESGPSIVHRKCF 285
+K EY+E G R+ F
Sbjct: 411 TKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQ 348
+LSGG++ + R++KE+ + ++K++A ER++SVWIGGSILASL +FQQ
Sbjct: 403 LLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQ 462
Query: 347 MWISKQE 327
MW SK +
Sbjct: 463 MWFSKAD 469
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQM 345
VLSGG++ PG++ R++KE+ L P+ + I++I PP S W G +++++STF +
Sbjct: 402 VLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEA 461
Query: 344 W-ISKQEYDE----SGPSIVH 297
W I K+++ + +GPS V+
Sbjct: 462 WCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 50.4 bits (115), Expect = 8e-07
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 16/88 (18%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTM----------------KIKIIAPPERKYSVWI 387
VLSGG+TM+ R+Q+++ + + + ++ +++ P ++Y+VW
Sbjct: 375 VLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWF 434
Query: 386 GGSILASLSTFQQMWISKQEYDESGPSI 303
GGS+LAS + F + +K EY+E G SI
Sbjct: 435 GGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAP--------------STMKIKIIAPPERKYSVWIGG 381
VLSGG+TM+ R+Q +I + +++ ++A P + Y+ W GG
Sbjct: 344 VLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGG 403
Query: 380 SILASLSTFQQMWISKQEYDESGPSI 303
S+ AS F + +K+EY+E G SI
Sbjct: 404 SVAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 11/63 (17%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSIL 372
VLSGG+TMYPG+ +R++KE+ L + ++++I PP RK+ V++GG++L
Sbjct: 328 VLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 387
Query: 371 ASL 363
A +
Sbjct: 388 AGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
+++GG ++ PG+ R++ I P +K++ + W G + A+ S F +
Sbjct: 627 LVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTF 686
Query: 338 SKQEYDESGPSIVHRK 291
S +Y E G ++ HRK
Sbjct: 687 SLADYREHGENLFHRK 702
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -2
Query: 391 GSVDRSSPPSLPSNRC----GSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCS 236
G R PP PS+ G + + S A P+ ES SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPI--ESPSKRPRRRLVEHGHSGCS 121
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -2
Query: 403 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCSIQAC 224
+TPY + P +N ++ +A P + A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 223 N 221
N
Sbjct: 272 N 272
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 381 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTGGDSRVH 497
++DP G+L W+ +D + CRW G +C L TG R+H
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNL--TGHVLRLH 84
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 381 STDPYGVLPLWRSNDLNLHCRW-GESC 458
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 250 RAAGGSDARCV*KHFLCTMEGPDS 321
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = -2
Query: 385 VDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCSIQ 230
V + P N C S +TTS AP L E KR A PAA S++
Sbjct: 46 VTHTDLPDESGNGCTSGEGATTSTAPALEAEKVDKREA------PAASASVE 91
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 250 RAAGGSDARCV*KHFLCTM----EGPDSSYSCFEIHICWK 357
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 348 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCDFLLHTGG 482
+L+ E S P +LPL NDL+ RWG + GG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWGGGLSSVEGQGG 446
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 355 SNRC-GSRNRSTTSLAPPLYTESASKRTARRCLQQ 254
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 384 TDPYGVLPLWRSNDLNLHCRWGE-SCD 461
TDP L WR +DL CRW +CD
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACD 69
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 406 GSTPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQ 254
G P+G V S+PP P S S+ PPL + S+ ++ QQ
Sbjct: 504 GMGPFGMVSGSAPPPPPLPNIMSAGFPRLSVPPPLPLPTQSQNQSQPQQQQ 554
>11_06_0094 -
20007535-20007658,20007759-20008367,20009021-20009094,
20009187-20009837
Length = 485
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 348 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRW-GESC 458
LLE +EG D +T G+L WR D CRW G C
Sbjct: 56 LLEFKEGIADDTT---GLLASWRPEDGQDCCRWTGVRC 90
>07_03_0463 -
18449908-18450171,18450718-18450810,18451170-18451254,
18451607-18451705,18452099-18452238,18453036-18453482
Length = 375
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 183 ITIISYVQLN*RRLQA*IEQPAAGCWR 263
+T + +V L RLQ +E PAA CWR
Sbjct: 245 LTFVPFVVL---RLQKFLESPAATCWR 268
>03_06_0303 -
32994697-32994831,32994959-32995096,32995205-32995282,
32995399-32995475,32996355-32996676,32996756-32996986
Length = 326
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 325 TTSLAPPLYTESASKRTARRCLQQPA 248
TT A P+ S+S RRC+ QPA
Sbjct: 4 TTMKASPMSASSSSAPVLRRCVAQPA 29
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,372,287
Number of Sequences: 37544
Number of extensions: 300831
Number of successful extensions: 872
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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