Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2270
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 163 5e-41
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 163 5e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 163 5e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 163 5e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 163 5e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 163 5e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 163 5e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 163 5e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 163 5e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 157 3e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 155 1e-38
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 92 2e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 87 9e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 5e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 57 9e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.017
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.017
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.37
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.37
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.37
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.6
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 4.6
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 4.6
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.6
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.6
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 4.6
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 4.6
AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical ... 27 6.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 255 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 314
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 315 SKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 285 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 344
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 345 SKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 163 bits (397), Expect = 5e-41
Identities = 77/78 (98%), Positives = 77/78 (98%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 359 SKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 157 bits (382), Expect = 3e-39
Identities = 76/78 (97%), Positives = 76/78 (97%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTTMYPGIA RMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 155 bits (377), Expect = 1e-38
Identities = 73/78 (93%), Positives = 75/78 (96%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGT+M+PGIA RMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 338 SKQEYDESGPSIVHRKCF 285
SKQEYDESGPSIVHRKCF
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.9 bits (218), Expect = 2e-19
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -1
Query: 515 LSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQM 345
++GG ++ G R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQM
Sbjct: 357 VTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQM 416
Query: 344 WISKQEYDESGPSIVHRKC 288
W+SK EYDESG SIV +KC
Sbjct: 417 WVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 86.6 bits (205), Expect = 9e-18
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 339
VLSGGTT++ G R+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+
Sbjct: 297 VLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWL 356
Query: 338 SKQEYDESGPSIVHRKCF 285
K+EY++ G S +H++ F
Sbjct: 357 GKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.9 bits (166), Expect = 5e-13
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 13/82 (15%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSIL 372
VLSGGTTMYPG+ +R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 371 ASL--STFQQMWISKQEYDESG 312
A+L Q W+SK+EY+E G
Sbjct: 362 ANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 56.8 bits (131), Expect = 9e-09
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 16/88 (18%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALA----------------PSTMKIKIIAPPERKYSVWI 387
VLSGG+TM+ A ++Q+++ L+ P + +++I+ ++Y+VW
Sbjct: 327 VLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWF 386
Query: 386 GGSILASLSTFQQMWISKQEYDESGPSI 303
GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 387 GGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/63 (34%), Positives = 42/63 (66%)
Frame = -1
Query: 515 LSGGTTMYPGIAARMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 336
L+GG ++ PGIA ++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS
Sbjct: 477 LAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCIS 536
Query: 335 KQE 327
Q+
Sbjct: 537 LQQ 539
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQ 348
++ GG++ +PG R+++E+ ++ P+ + + + P+ W G L L+ +
Sbjct: 313 IVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKV 368
Query: 347 MWISKQEYDESGPSIVHRKCF*T 279
WI+++++DE G S+ F T
Sbjct: 369 PWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQ 348
++ GG++ +PG R+++E+ ++ P+ + + + P+ W G L L+ +
Sbjct: 313 IVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKV 368
Query: 347 MWISKQEYDESGPSIVHRKCF*T 279
WI+++++DE G S+ F T
Sbjct: 369 PWINRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 390 PYGVLPLWRSNDLNLHCRWGESCD 461
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = -1
Query: 518 VLSGGTTMYPGIAARMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSILAS 366
+L+GG + PG+ R+++EI + + KI +I E K + W+G S+L S
Sbjct: 214 LLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGS 273
Query: 365 L-STFQQMWISKQEY 324
L T ++ ++ +E+
Sbjct: 274 LRETIERKSLTLEEW 288
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 226 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 318
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -2
Query: 394 YGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCSIQA 227
+ S + ++PP P GSR S TSL ++S S R QP S QA
Sbjct: 208 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 263
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -2
Query: 394 YGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCSIQA 227
+ S + ++PP P GSR S TSL ++S S R QP S QA
Sbjct: 208 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 263
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 329 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 228
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 226 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 318
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -2
Query: 394 YGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTESASKRTARRCLQQPAAGCSIQA 227
+ S + ++PP P GSR S TSL ++S S R QP S QA
Sbjct: 253 HSSPNFAAPPHPPRPMMGSRAGSVTSLDDVNMSQSYSATMPRAYPPQPGRAYSAQA 308
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 410 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 249
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AF016673-3|AAB66122.2| 366|Caenorhabditis elegans Hypothetical
protein T06D4.2 protein.
Length = 366
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -2
Query: 484 SPPVCKRKXXXXXXXXXXXXXXXXXRGSTPYGSVDRSSPPSLPSNRCG 341
SPP +R+ RGS G VD SSP PSN G
Sbjct: 5 SPPPAQREYSHLKTACLRATSFVETRGSCSSGDVDESSPSCSPSNHNG 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,397,618
Number of Sequences: 27780
Number of extensions: 224728
Number of successful extensions: 614
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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