Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2268
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    30   3.1  
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    30   3.1  
D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol 1,4,5...    28   9.4  
AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol 1,4...    28   9.4  
AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,...    28   9.4  
AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,...    28   9.4  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and
           fatty acid-bindingglycoprotein protein.
          Length = 3351

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 567 GTNQNGRARNCVKDDKRKISFEYAEYGALN 478
           G    GRAR  + DD  KIS +Y  YG  N
Sbjct: 697 GVAAGGRARRSIVDDVSKISKKYKMYGVKN 726


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
           protein.
          Length = 3351

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 567 GTNQNGRARNCVKDDKRKISFEYAEYGALN 478
           G    GRAR  + DD  KIS +Y  YG  N
Sbjct: 697 GVAAGGRARRSIVDDVSKISKKYKMYGVKN 726


>D90403-1|BAA14399.1| 2833|Drosophila melanogaster inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2833

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 467 EYRLFNAPYSAYSKEIFRLSSLTQFLARPFWFVPK 571
           +YRL + PYSA    +F L + T  +ARP   VP+
Sbjct: 372 QYRLVSVPYSADIASVFVLDATT--MARPDSLVPQ 404


>AJ238949-1|CAB51853.1| 2828|Drosophila melanogaster inositol
           1,4,5-trisphosphate receptorprotein.
          Length = 2828

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 467 EYRLFNAPYSAYSKEIFRLSSLTQFLARPFWFVPK 571
           +YRL + PYSA    +F L + T  +ARP   VP+
Sbjct: 372 QYRLVSVPYSADIASVFVLDATT--MARPDSLVPQ 404


>AE014297-265|AAF52015.2| 2828|Drosophila melanogaster CG1063-PA,
           isoform A protein.
          Length = 2828

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 467 EYRLFNAPYSAYSKEIFRLSSLTQFLARPFWFVPK 571
           +YRL + PYSA    +F L + T  +ARP   VP+
Sbjct: 371 QYRLVSVPYSADIASVFVLDATT--MARPDSLVPQ 403


>AE014297-264|AAN13240.1| 2837|Drosophila melanogaster CG1063-PB,
           isoform B protein.
          Length = 2837

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 467 EYRLFNAPYSAYSKEIFRLSSLTQFLARPFWFVPK 571
           +YRL + PYSA    +F L + T  +ARP   VP+
Sbjct: 371 QYRLVSVPYSADIASVFVLDATT--MARPDSLVPQ 403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,524,440
Number of Sequences: 53049
Number of extensions: 564171
Number of successful extensions: 1090
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)