Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2265
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   2.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   2.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   2.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   2.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   2.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   2.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   3.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.0  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   8.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
 Frame = +3

Query: 327 PDLDVPVPEKTPP-----PSEAPRDSPSPTEPPKLNL 422
           P  ++P P+++ P      S +P   P+P+ PP+  L
Sbjct: 73  PKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERL 109


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +3

Query: 276 PDDAELLVIAPAPGDQMPDLDV-PVPEKTPPPSEAPRDSPSPTEPPKLN 419
           P++ + L      G   P+    P P +    S  P D P+P+ P  ++
Sbjct: 22  PEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSIS 70


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +3

Query: 357 TPPPS---EAPRDSPSPTEPPKLNLQMTAA 437
           TPP S   +  +D  SPT   KLN   T++
Sbjct: 34  TPPQSPNQQYTKDCSSPTPSDKLNTSTTSS 63


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 345 VPEKTPPPSEAPRDSPSPTEP 407
           +P   PP  E   ++P P EP
Sbjct: 45  IPYAQPPVGENRFEAPKPVEP 65


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 345 VPEKTPPPSEAPRDSPSPTEP 407
           +P   PP  E   ++P P EP
Sbjct: 45  IPYAQPPVGENRFEAPKPVEP 65


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 345 VPEKTPPPSEAPRDSPSPTEP 407
           +P   PP  E   ++P P EP
Sbjct: 45  IPYAQPPVGENRFEAPKPVEP 65


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 345 VPEKTPPPSEAPRDSPSPTEP 407
           +P   PP  E   ++P P EP
Sbjct: 45  IPYAQPPVGENRFEAPKPVEP 65


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 345 VPEKTPPPSEAPRDSPSPTEP 407
           +P   PP  E   ++P P EP
Sbjct: 45  IPYAQPPVGENRFEAPKPVEP 65


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 342 PVPEKTPPPSEAPRDSPSPTE 404
           P  +  P P+ A R++P P +
Sbjct: 252 PATKSKPRPAPASRNAPEPAD 272


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 491 RHFLRVELLLGGEMC 447
           RHF +  L++G E C
Sbjct: 41  RHFFKKNLIVGSENC 55


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 419 PADDRGRXASTS 454
           PADDRGR A+ +
Sbjct: 171 PADDRGRVAAAA 182


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = +3

Query: 330 DLDVPVPEKTPPPSEAPRDSPSPTEPPKLNLQMTAAXMRAHLAAKKKFDPKK 485
           DLDV     TPPP +  ++SP      K + +       A +    +  P+K
Sbjct: 54  DLDVT---GTPPPLDCSKNSPEKESEEKKSKEKPPYSYNALIMMAIRNSPEK 102


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 58   HDSATCGRRQTSTATGLICTQKKE 129
            H   T      ST   L CT+KKE
Sbjct: 1348 HRFGTIAHILASTELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 58   HDSATCGRRQTSTATGLICTQKKE 129
            H   T      ST   L CT+KKE
Sbjct: 1348 HRFGTIAHILASTELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 58   HDSATCGRRQTSTATGLICTQKKE 129
            H   T      ST   L CT+KKE
Sbjct: 1348 HRFGTIAHILASTELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 58   HDSATCGRRQTSTATGLICTQKKE 129
            H   T      ST   L CT+KKE
Sbjct: 1348 HRFGTIAHILASTELNLCCTKKKE 1371


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 24  DMSANGSAAIEPRLCHVRKTPDFDGYGF 107
           DMSA  SA ++P   +    P    YG+
Sbjct: 51  DMSAWTSAGLQPTTGYYPYDPALAAYGY 78


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -2

Query: 473 ELLLGGEMC 447
           EL+LGGE+C
Sbjct: 503 ELVLGGEVC 511


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 360 PPPSEAPRDSPSPTEPPKLNLQM 428
           P PS     S +PT PP    Q+
Sbjct: 133 PSPSTTDDLSTNPTPPPHYTYQI 155


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 67  ATCGRRQTSTATGLICTQKKEN 132
           ATC  R+   A G +C+ +  N
Sbjct: 99  ATCTPREPGVAGGDVCSSESFN 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,680
Number of Sequences: 336
Number of extensions: 2897
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)