Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2264
         (514 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070055-1|AAH70055.1|  640|Homo sapiens guanylate binding prote...    30   5.5  
BC007537-1|AAH07537.1|  782|Homo sapiens CSRP2 binding protein p...    29   7.2  
AL050321-2|CAM28294.1|  782|Homo sapiens CSRP2 binding protein p...    29   7.2  
AL050321-1|CAB56651.2|  781|Homo sapiens CSRP2 binding protein p...    29   7.2  
AL136097-9|CAI16204.1|  271|Homo sapiens nucleolar protein 8 pro...    29   9.5  

>BC070055-1|AAH70055.1|  640|Homo sapiens guanylate binding protein
           4 protein.
          Length = 640

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
 Frame = -1

Query: 514 FLQEKIVTQESNDQSDGQLTEDQSFDSLDTDDRNQDRHDSFHFKLQEQQDGKQ*LLL*EA 335
           FLQ ++V +ES  QSD  LT  +   S+  +   ++  +     L+E+Q  +Q ++  + 
Sbjct: 478 FLQSQVVVEESILQSDKALTAGEK--SIAAERAMKEAAEKEQELLREKQKEQQQMMEAQE 535

Query: 334 TSFTVLVVLREFNIESPVGSV--RDLRVLEHKLR 239
            SF   +   E  +E    ++     R+L+HKL+
Sbjct: 536 RSFQEYMAQMEKKLEEERENLLREHERLLKHKLK 569


>BC007537-1|AAH07537.1|  782|Homo sapiens CSRP2 binding protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 505 EKIVTQESNDQSDGQLTEDQSFDSLDTDD 419
           E ++  ES DQ+   L+ DQS DSL++D+
Sbjct: 35  ETLLIVESEDQASVDLSHDQSGDSLNSDE 63


>AL050321-2|CAM28294.1|  782|Homo sapiens CSRP2 binding protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 505 EKIVTQESNDQSDGQLTEDQSFDSLDTDD 419
           E ++  ES DQ+   L+ DQS DSL++D+
Sbjct: 35  ETLLIVESEDQASVDLSHDQSGDSLNSDE 63


>AL050321-1|CAB56651.2|  781|Homo sapiens CSRP2 binding protein
           protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 505 EKIVTQESNDQSDGQLTEDQSFDSLDTDD 419
           E ++  ES DQ+   L+ DQS DSL++D+
Sbjct: 35  ETLLIVESEDQASVDLSHDQSGDSLNSDE 63


>AL136097-9|CAI16204.1|  271|Homo sapiens nucleolar protein 8
           protein.
          Length = 271

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 511 LQEKIVTQE-SNDQSDGQLTEDQSFDSLDTDDRNQDRHDSFHFKLQEQQDGK 359
           +Q+K+V    +N +S G+ T  + FDS D DD +    DS  FK++ Q +G+
Sbjct: 171 VQKKLVHNALANLESMGK-TSGKLFDSSD-DDESDSEDDSNRFKIKPQFEGR 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,684,865
Number of Sequences: 237096
Number of extensions: 1534122
Number of successful extensions: 3489
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3487
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)