Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2264
         (514 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical...    30   0.85 
Z81506-7|CAB04127.1|  676|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81506-6|CAB04124.1|  368|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AC006733-7|AAF60484.1|  279|Caenorhabditis elegans Hypothetical ...    29   1.5  
U00047-6|AAA50692.1|  279|Caenorhabditis elegans Hypothetical pr...    28   4.5  
CU457740-11|CAM36341.1|  353|Caenorhabditis elegans Hypothetical...    27   6.0  
Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    27   7.9  
AL021346-1|CAA16154.1|  823|Caenorhabditis elegans Hypothetical ...    27   7.9  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    27   7.9  

>AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical
           protein R07C3.4 protein.
          Length = 723

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 146 TGRALDETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRGFDIEFPE 310
           TG+A  +T +DK I  ++  IL  N  +F +P     N+ + + A   F IE  E
Sbjct: 420 TGKATRDTLVDKYILHKIQMILGPNIKQFLIPAAKTDNSSMRF-ARGAFGIEILE 473


>Z81506-7|CAB04127.1|  676|Caenorhabditis elegans Hypothetical
           protein F16H6.9 protein.
          Length = 676

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = -1

Query: 337 ATSFTVLVVLREFNIESPVGSVRDLRVLEHKL-----RQFKLE-FVGVQNPRHPIIDDFV 176
           A  FTVL+ +       P+    D+ +L +       +QF  +  V   + R  +I+ F+
Sbjct: 33  AGHFTVLITVTGLR-SVPIDIAFDVEILGNSALLTNAKQFNCQNAVSQVDQRKSVINIFL 91

Query: 175 DVCLVQCPPRFRSYTDFVVQI**NFHFEACHGRSGFGTITDNTVQQIITRP*PRQFDF 2
           D  L+    R R  T     I   + F AC  +       D  VQ+++ RP  R FDF
Sbjct: 92  DSLLIAI--RSRDATTISAFIDDKYIFVACERKFS----KDEIVQRLVNRPADRTFDF 143


>Z81506-6|CAB04124.1|  368|Caenorhabditis elegans Hypothetical
           protein F16H6.8 protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = -1

Query: 337 ATSFTVLVVLREFNIESPVGSVRDLRVLEHKL-----RQFKLE-FVGVQNPRHPIIDDFV 176
           A  FTVL+ +       P+    D+ +L +       +QF  +  V   + R  +I+ F+
Sbjct: 33  AGHFTVLITVTGLR-SVPIDIAFDVEILGNSALLTNAKQFNCQNAVSQVDQRKSVINIFL 91

Query: 175 DVCLVQCPPRFRSYTDFVVQI**NFHFEACHGRSGFGTITDNTVQQIITRP*PRQFDF 2
           D  L+    R R  T     I   + F AC  +       D  VQ+++ RP  R FDF
Sbjct: 92  DSLLIAI--RSRDATTISAFIDDKYIFVACERKFS----KDEIVQRLVNRPADRTFDF 143


>AC006733-7|AAF60484.1|  279|Caenorhabditis elegans Hypothetical
           protein Y32H12A.6 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 463 QLTEDQSFDSLDTDDRNQDRHDSFHFKLQEQQD 365
           Q+TE + F++ DTD +  +R   F F+L  Q D
Sbjct: 209 QITEVELFNTTDTDKQTMERFVEFSFELLLQMD 241


>U00047-6|AAA50692.1|  279|Caenorhabditis elegans Hypothetical
           protein ZK418.8 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 152 RALDETNIDKVIYDRVARILDTNEFKFKLPEFMFQNAEVSYRADRG 289
           RA DE  + K++  R+A I+D  +  +K  EF  +   V Y   RG
Sbjct: 138 RATDEQCV-KLVRLRIAEIIDNVQKPWKTAEFEVETQMVGYLVGRG 182


>CU457740-11|CAM36341.1|  353|Caenorhabditis elegans Hypothetical
           protein C50E10.11 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
 Frame = -1

Query: 328 FTVLVVLREFNIES--PVG--SVRDLRVLEHKLRQFKLEFVGV 212
           FT L +LREF+  S  PV   ++ +LRV +  LR F + F+G+
Sbjct: 217 FTNLRILREFDRNSMLPVRFQAMENLRVFDLTLRIFLVGFIGI 259


>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 457 TEDQSFDSLDTDDRNQDRHDSFHFKLQEQQ 368
           TE++   S  +D  N+D  + F+ KL++QQ
Sbjct: 354 TEERDNPSKKSDSENEDNDNDFNEKLKQQQ 383


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 457 TEDQSFDSLDTDDRNQDRHDSFHFKLQEQQ 368
           TE++   S  +D  N+D  + F+ KL++QQ
Sbjct: 354 TEERDNPSKKSDSENEDNDNDFNEKLKQQQ 383


>AL021346-1|CAA16154.1|  823|Caenorhabditis elegans Hypothetical
           protein H37A05.1 protein.
          Length = 823

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +3

Query: 153 GHWTRQTSTKSSMIGWRGFWTPTNSSLNCRSLCSKTRRSLTEPTGDSILNSLRTTRTVKL 332
           GH +R  S  SS I     +TPT +  N +   + TR S+    G+ I +S   T  V+ 
Sbjct: 426 GHVSRGVSQPSSPISNHDDYTPTTTPPNDK---TPTRESVRFGAGNDIPSSTSATNGVRS 482

Query: 333 VAS 341
            AS
Sbjct: 483 RAS 485


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 487 ESNDQSDGQLTEDQSFDSLDTDDRNQDR 404
           +  DQ DG+  ED   D  DT+++ Q R
Sbjct: 200 DEEDQEDGENEEDADDDDDDTEEQQQPR 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,064,207
Number of Sequences: 27780
Number of extensions: 234056
Number of successful extensions: 800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)