Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2261
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 454 KFCRGLPCYGGTSLLSSTKH 513
           K   GLP YG T  LSS  +
Sbjct: 255 KIALGLPVYGKTFTLSSASN 274


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 334 WFQRNVDLHDDLEL 293
           WF+R + LHD+  L
Sbjct: 22  WFRRGLRLHDNPSL 35


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 454 KFCRGLPCYGGTSLLSST 507
           K   G+P YG T  LS+T
Sbjct: 326 KLVIGMPTYGRTFTLSNT 343


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 516 PMLCRRKQTCPSVTR 472
           P+LC+R+Q C  +++
Sbjct: 84  PVLCKRQQYCQLMSK 98


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 487 SLRNKVTLYKTCIRPRHDGM 428
           + RN    Y  C RPR++ +
Sbjct: 393 TFRNNRDEYNVCFRPRNNSI 412


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,401
Number of Sequences: 336
Number of extensions: 3032
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)