Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2260
         (376 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    37   0.10 
UniRef50_Q7UTX7 Cluster: Putative uncharacterized protein; n=2; ...    34   0.98 
UniRef50_Q8JS18 Cluster: Metalloproteinase MP-NASE; n=1; Phthori...    32   3.9  
UniRef50_UPI00015615AE Cluster: PREDICTED: similar to hCG22014; ...    31   5.2  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
          Bombyx mori|Rep: Putative uncharacterized protein -
          Bombyx mori (Silk moth)
          Length = 77

 Score = 37.1 bits (82), Expect = 0.10
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -1

Query: 94 IVFVLLVDDSADFVVPQSINNRP 26
          I+F++++ D ADFVVPQSIN RP
Sbjct: 16 ILFMIILADPADFVVPQSINKRP 38


>UniRef50_Q7UTX7 Cluster: Putative uncharacterized protein; n=2;
           Planctomycetaceae|Rep: Putative uncharacterized protein
           - Rhodopirellula baltica
          Length = 313

 Score = 33.9 bits (74), Expect = 0.98
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = -3

Query: 251 STQTTISKSYSSWLSPCSPNCPGETEKAFGPIVSLHSNKKKTRTE 117
           ++QT+I  +   WL P    CP   E  FGP   L  NK KT TE
Sbjct: 86  TSQTSIFLAQPHWLMPRRDKCPPIFESPFGP---LGQNKGKTMTE 127


>UniRef50_Q8JS18 Cluster: Metalloproteinase MP-NASE; n=1;
           Phthorimaea operculella granulovirus|Rep:
           Metalloproteinase MP-NASE - Phthorimaea operculella
           granulovirus
          Length = 469

 Score = 31.9 bits (69), Expect = 3.9
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = +2

Query: 11  RNFIKRPVIYRLRNYKVCRVIY**NKNNRTLIDSIILXXXXXY*NEGLLL--ARKPFQFH 184
           +NF K+  ++RL+ + V + IY  NKNN T   SI L     Y ++ L+L   R+ F+  
Sbjct: 55  QNFNKQINVHRLKRFTVDQNIYWPNKNNITY--SIDLSSVPKYLDQNLVLNETRRAFEMW 112

Query: 185 QDS 193
           Q+S
Sbjct: 113 QNS 115


>UniRef50_UPI00015615AE Cluster: PREDICTED: similar to hCG22014;
           n=1; Equus caballus|Rep: PREDICTED: similar to hCG22014
           - Equus caballus
          Length = 1100

 Score = 31.5 bits (68), Expect = 5.2
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -3

Query: 275 YLY*VSLGSTQTTISKSYSSWLSPCSPNCPGETEKAFGPIVSLHSNKKKTRTE 117
           YL  VS  +  TT   + SSW  P SP  P ET+K       L  N   T T+
Sbjct: 767 YLSSVSAAAEGTTPESNSSSWSPPRSPASPNETKKHRQVAEDLIKNMLTTATK 819


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,032,706
Number of Sequences: 1657284
Number of extensions: 5649864
Number of successful extensions: 14581
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14578
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)