Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2260
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   0.77 
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    22   2.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   3.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.2  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      20   9.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 40  SIEELQSLPSHLLIKQKQSDLNRFDHSVLV 129
           SIE+ Q    HL  +  QSD N+ D  V V
Sbjct: 129 SIEKHQGAVCHLETRPNQSDNNQLDALVKV 158


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -2

Query: 318 RSVIRGIRETSALELPILGLSRK 250
           RS IR     S+L LPI GLS K
Sbjct: 45  RSRIRYQGRISSLILPIYGLSTK 67


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 293 SRIPLMTDRSRGPLRNSMNVKRALSL 370
           S  P+M  R R  + NS+N  + L L
Sbjct: 37  SNKPIMEKRRRARINNSLNELKTLIL 62


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 203 CSPNCPGETEKAFGPIVSLHSNKKK 129
           C P  P +T     P   LH NKK+
Sbjct: 522 CDPYRPWQTVYNHRPWQQLHLNKKQ 546


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 212 LSPCSPNCPGETEKAFGPIV 153
           + PC    PG++ + FGP +
Sbjct: 42  VKPCVSCGPGQSGQCFGPSI 61


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +1

Query: 52  LQSLPSHLLIKQKQS 96
           +QS+P+HLL  +K++
Sbjct: 268 IQSIPTHLLDSEKKN 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +2

Query: 161 ARKPFQFHQDSWASTDSARRSR 226
           A  PF +H D W   +  +  R
Sbjct: 927 ATGPFAYHGDQWVGFEDIKSVR 948



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +1

Query: 286  RCFANSSNDRSESRPTEKLNERQTGPKP 369
            +C     ND+++ +PT        G +P
Sbjct: 2198 KCILGRDNDKTKPKPTTMKPTTTIGYEP 2225


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 191 CPGETEKAFGPIVSLHSNKKK 129
           CP +  K     VSLHS K K
Sbjct: 12  CPVKKRKCTVSNVSLHSLKNK 32


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 269 IGSSRADVSRIPLMTD 316
           +GSS  DVS +  +TD
Sbjct: 56  VGSSGVDVSTVNSITD 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 329 GRDSDRSLEEFAKHLPL 279
           G  SDR LE F + LP+
Sbjct: 567 GLGSDRRLELFLELLPM 583


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,094
Number of Sequences: 336
Number of extensions: 1374
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)