Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2260
         (376 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053989-1|AAH53989.1|  631|Homo sapiens zinc finger protein 179...    29   6.5  
AB026054-1|BAA84698.1|  632|Homo sapiens brain finger protein pr...    29   6.5  

>BC053989-1|AAH53989.1|  631|Homo sapiens zinc finger protein 179
           protein.
          Length = 631

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -1

Query: 295 RNICP*TTYIRSLSEALRQLLANPTPPG-----*VRARPTVLVKLKRLSG 161
           R IC     +RSL E ++ L   P PP       VRA P +LV++    G
Sbjct: 98  RKICKQKRGLRSLGEKMKLLPQRPLPPALQETCPVRAEPLLLVRINASGG 147


>AB026054-1|BAA84698.1|  632|Homo sapiens brain finger protein
           protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = -1

Query: 295 RNICP*TTYIRSLSEALRQLLANPTPPG-----*VRARPTVLVKLKRLSG 161
           R IC     +RSL E ++ L   P PP       VRA P +LV++    G
Sbjct: 98  RKICKQKRGLRSLGEKMKLLPQRPLPPALQETCPVRAEPLLLVRINASGG 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,783,558
Number of Sequences: 237096
Number of extensions: 824858
Number of successful extensions: 1784
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)