Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2258
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ062758-1|AAY56631.1|  214|Drosophila melanogaster olfactory-sp...    28   7.2  
AY118294-1|AAM48323.1|  214|Drosophila melanogaster GH03980p pro...    28   7.2  
AE014134-3183|AAF53861.1|  214|Drosophila melanogaster CG10658-P...    28   7.2  

>DQ062758-1|AAY56631.1|  214|Drosophila melanogaster
           olfactory-specific protein Os9 protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 443 RFPSGGRFCEALLL--VKLALSTSSDLKTREPT 535
           RF  GG  C ++LL  + LAL+ SS +K R PT
Sbjct: 9   RFLIGGSTCCSMLLGLICLALADSSQVKERSPT 41


>AY118294-1|AAM48323.1|  214|Drosophila melanogaster GH03980p
           protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 443 RFPSGGRFCEALLL--VKLALSTSSDLKTREPT 535
           RF  GG  C ++LL  + LAL+ SS +K R PT
Sbjct: 9   RFLIGGSTCCSMLLGLICLALADSSQVKERSPT 41


>AE014134-3183|AAF53861.1|  214|Drosophila melanogaster CG10658-PA
           protein.
          Length = 214

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 443 RFPSGGRFCEALLL--VKLALSTSSDLKTREPT 535
           RF  GG  C ++LL  + LAL+ SS +K R PT
Sbjct: 9   RFLIGGSTCCSMLLGLICLALADSSQVKERSPT 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,148,091
Number of Sequences: 53049
Number of extensions: 364351
Number of successful extensions: 676
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)