Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2257
         (589 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7CB3 Cluster: PREDICTED: similar to aquaporin ...    52   1e-05
UniRef50_UPI0000D56B80 Cluster: PREDICTED: similar to CG12251-PA...    40   0.033
UniRef50_Q7RKE3 Cluster: Erythrocyte membrane protein 3; n=5; Pl...    34   2.8  
UniRef50_Q504G2 Cluster: Zgc:109897; n=7; Euteleostomi|Rep: Zgc:...    33   6.5  
UniRef50_Q54B26 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_UPI0000DA417A Cluster: PREDICTED: hypothetical protein;...    32   8.6  
UniRef50_UPI000069E7EE Cluster: Protein FAM38A.; n=6; Euteleosto...    32   8.6  
UniRef50_A5DFG8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_UPI0000DB7CB3 Cluster: PREDICTED: similar to aquaporin
           CG12251-PA isoform 1; n=2; Apis mellifera|Rep:
           PREDICTED: similar to aquaporin CG12251-PA isoform 1 -
           Apis mellifera
          Length = 273

 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 25/57 (43%), Positives = 32/57 (56%)
 Frame = +3

Query: 141 TFAPLVVSTLFILLTSLLAHCARRLVHKTINEPFVRXXXXXXXXXXXXCGCCFELIV 311
           T   L VSTL+I+LT+L+A+  RR     I +PFVR            CG CFELI+
Sbjct: 4   TIIALAVSTLYIILTTLIAYWMRRYTDYYIRDPFVRSLFLEAIATGELCGACFELII 60


>UniRef50_UPI0000D56B80 Cluster: PREDICTED: similar to CG12251-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG12251-PA - Tribolium castaneum
          Length = 860

 Score = 40.3 bits (90), Expect = 0.033
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +3

Query: 150 PLVVSTLFILLTSLLAHCARRLVHKTINEPFVRXXXXXXXXXXXXCGCCFELIV 311
           PLV+ST +I+L   LA   R++V+  +N+   +            C  CFELI+
Sbjct: 594 PLVISTTYIILALALAALTRKVVNLVLNDSLFKRMILEFIATLELCAACFELII 647


>UniRef50_Q7RKE3 Cluster: Erythrocyte membrane protein 3; n=5;
            Plasmodium (Vinckeia)|Rep: Erythrocyte membrane protein 3
            - Plasmodium yoelii yoelii
          Length = 1178

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = -3

Query: 218  NEPPGAMSQQ*RQKDEKRRYDQRSERDSVDLKNFKMRKELKQKTRIQIFLVLRS 57
            N    +M +   +KD+ +   +++ R   +LKN K+ K + ++T  ++F+ LRS
Sbjct: 1009 NNTYSSMDENESKKDKNKISGKKTSRKETNLKNKKLEKNIVKETEKKVFIPLRS 1062


>UniRef50_Q504G2 Cluster: Zgc:109897; n=7; Euteleostomi|Rep:
           Zgc:109897 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 346

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -3

Query: 239 WLVNSLVNEPPGAMSQQ*RQKDEKRRYDQRSERDSVDLKNFKMRKELKQKTRIQIFLVLR 60
           +++ S + EPP    +  RQ    RR   R E+  +  +  KM +  ++ T  ++  +L 
Sbjct: 190 YMLGSFLAEPPPPRQRVERQ----RRVPSREEKRIMPTQLKKMEESHQEATEKEVERILG 245

Query: 59  SLTRYFKDE 33
            L RYFKD+
Sbjct: 246 CLQRYFKDD 254


>UniRef50_Q54B26 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 595

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = -3

Query: 260 FE*QSNEWLVNSLVNEPPGAMSQQ*RQKDEKRRYDQRSERDSVDLKNFKMRKELKQKTRI 81
           F+ Q  + L+N+L  E      QQ +++ E  +  Q+ E+D  D    K RK+ KQ  R+
Sbjct: 146 FKDQQRKLLINTLEEEKQQQQQQQQQEQQELEQEQQQDEQDE-DHNVNKKRKQKKQLERL 204

Query: 80  QIF 72
           + F
Sbjct: 205 KQF 207


>UniRef50_UPI0000DA417A Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 137

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 583 DWGSDPGTEDRTSSAGESFSPVGT*NSLGPRSRSRGPIP 467
           DWG  PG  + T     S +P GT  + GPR+R R P P
Sbjct: 23  DWGVWPG--EGTPPLPSSRTPAGTAGTTGPRARVRPPSP 59


>UniRef50_UPI000069E7EE Cluster: Protein FAM38A.; n=6;
            Euteleostomi|Rep: Protein FAM38A. - Xenopus tropicalis
          Length = 2004

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -3

Query: 215  EPPGAMSQQ*RQKDEKRRYDQRSERDSVDLKNFKMRKELKQKTRIQIFLVLRSLTRYF 42
            EP G  S   RQ+  K       ERDS+  K+  ++K+ K +  +++ ++   + ++F
Sbjct: 1351 EPAGGSSSSLRQRKRKESQGSVQERDSLKEKSLDVQKKKKGRVALRVKIMGMKMQQFF 1408


>UniRef50_A5DFG8 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 559

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +1

Query: 409 APSAEPPTWSSAPRGRAGYVGLVRDCETVG-PRNFKSLPD*TTPLHSTSDL---PSRDQN 576
           AP+ + P   SAP G  G  GLV D  T+  P  F++ P   TP +S+S L   P     
Sbjct: 53  APAMQSPAPLSAPYGALGAYGLVPDVSTLSLPMGFEA-P--MTPYYSSSSLVMDPMSFSK 109

Query: 577 PSQ 585
           PSQ
Sbjct: 110 PSQ 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,133,920
Number of Sequences: 1657284
Number of extensions: 10613032
Number of successful extensions: 29864
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29791
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)