Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2256
(455 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 2.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.7
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 2.7
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 3.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 3.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 3.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 3.6
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 8.4
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 8.4
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 8.4
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 8.4
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 2.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 407 IYNVEAAKPVTLQEPVKIGLIDIKTGQLKEPKTGK 303
I+ V KP T + +K G+I+ + LK +TG+
Sbjct: 132 IHRVLPGKPTTTSDELKRGIINPEDVMLKR-RTGE 165
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 117 LVNSRFISGHNSTWFLKHL 173
+++S F + HN+T +L H+
Sbjct: 305 IISSVFTTRHNATCYLSHV 323
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 117 LVNSRFISGHNSTWFLKHL 173
+++S F + HN+T +L H+
Sbjct: 11 IISSVFTTRHNATCYLSHV 29
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -1
Query: 194 LMQPKQDKVF---EEPSRIVSADKATVDK 117
L+QP D F ++ S IVSA K +DK
Sbjct: 103 LLQPYPDWSFAKYDDCSGIVSASKLAIDK 131
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -1
Query: 194 LMQPKQDKVF---EEPSRIVSADKATVDK 117
L+QP D F ++ S IVSA K +DK
Sbjct: 103 LLQPYPDWSFAKYDDCSGIVSASKLAIDK 131
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -1
Query: 194 LMQPKQDKVF---EEPSRIVSADKATVDK 117
L+QP D F ++ S IVSA K +DK
Sbjct: 103 LLQPYPDWSFAKYDDCSGIVSASKLAIDK 131
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 3.6
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -1
Query: 197 KLMQPKQD---KVFEEPSRIVSADKATVDK 117
+L++P D F++ S+IVSA K +DK
Sbjct: 103 RLLKPYPDWSFAEFKDCSKIVSAFKIAIDK 132
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 20.6 bits (41), Expect = 8.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 167 FEEPSRIVSADKATVDK 117
+E+ S IVSA K VDK
Sbjct: 121 YEDCSGIVSAFKIAVDK 137
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 20.6 bits (41), Expect = 8.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 82 ILRXITFLGSVTLSTVALSADTILLGSSN 168
+LR I +G+V S A +L GSS+
Sbjct: 2 VLRCIGDMGAVMTSLTLGPAGQVLAGSSS 30
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.6 bits (41), Expect = 8.4
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 180 LWLHQFTFHRLSSLY 224
+W+ F HR S++Y
Sbjct: 396 IWIPAFAIHRDSAIY 410
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.6 bits (41), Expect = 8.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 313 LGSFNCPVLMSISPIFTGSCKVTGLAASTLYITDSGSIIFL 435
LG VL+ + + TGLA ++ + GSIIF+
Sbjct: 24 LGILTLGVLIHLQILGVSKQIETGLAFPSITLIVLGSIIFV 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,079
Number of Sequences: 438
Number of extensions: 1987
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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