Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2255
         (470 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.4  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   2.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   4.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   7.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.6  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 203 QRACGFCPKPNIRFPFQWCSDHGHSCW 123
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 419 RVLKGCVGGEHRVVGLDDGS-GNLRRGVDG 333
           R   G + GE+ VV  DDGS   +R   DG
Sbjct: 210 RTSDGFIVGEYGVVSHDDGSLRGVRYTADG 239


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 293 LSVDYGKKSKLEFGHLPRASG 355
           L +DY    K +F H+  ASG
Sbjct: 153 LFLDYNPSQKRQFLHITLASG 173


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -1

Query: 377 GLDDGSGNLRRGVDGRTPV*TSCRSQRRDAPSISK*TQSRYLHRR 243
           G D G   L  GV GR+    S  + +  AP ++     RY   R
Sbjct: 254 GADPGKLVLGLGVYGRSFTLASASNNKLGAPIVAGGDAGRYTGER 298


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 304 VNGETLHQ*VSEPRAGTSTEGVEDQESLQTGTLV 203
           VNG+TLH+   + +  T  + V+    L +  L+
Sbjct: 20  VNGKTLHRSTRDDKYTTRYDNVDVDRILHSKRLL 53


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 206 GQRACGFCPKPNIRFPFQWCSDHG 135
           G +  GF  + +IR   +W  D+G
Sbjct: 397 GDQWIGFDDEKSIRNKMKWIKDNG 420


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 115 RCGQQLCPWSLH 150
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 56  PHQQQ*VQDRPRQ 18
           PHQQ  +Q +P Q
Sbjct: 204 PHQQPPIQQQPNQ 216


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 56  PHQQQ*VQDRPRQ 18
           PHQQ  +Q +P Q
Sbjct: 206 PHQQPPIQQQPNQ 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,346
Number of Sequences: 336
Number of extensions: 2329
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)