Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2255
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    58   1e-10
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    58   1e-10
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    58   1e-10
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    58   1e-10
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   7.1  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 58.4 bits (135), Expect = 1e-10
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
           ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R
Sbjct: 64  SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109



 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +2

Query: 143 HYTIGKEIVYLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDY 307
           HYT G E+V  VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 58.4 bits (135), Expect = 1e-10
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
           ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R
Sbjct: 64  SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109



 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +2

Query: 143 HYTIGKEIVYLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDY 307
           HYT G E+V  VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 58.4 bits (135), Expect = 1e-10
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
           ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R
Sbjct: 64  SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109



 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +2

Query: 143 HYTIGKEIVYLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDY 307
           HYT G E+V  VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 58.4 bits (135), Expect = 1e-10
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
           ++ P+P+VS  VVEPYN+ L+ H  +E++D  + +DNEA+YDIC R
Sbjct: 64  SVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFR 109



 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +2

Query: 143 HYTIGKEIVYLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDY 307
           HYT G E+V  VLD +RK  + C  LQGF + H            LL+ ++  +Y
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 55


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 67  HIQTVVSSRTTYYW*GRCGQQLCPWSLHHW 156
           H   +  +RT +Y   RC +  C +  ++W
Sbjct: 66  HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,783
Number of Sequences: 2352
Number of extensions: 9915
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)