Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2255
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 186 5e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 186 5e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 186 5e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 186 5e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 177 4e-45
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 177 4e-45
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 177 4e-45
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 177 4e-45
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 176 8e-45
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 173 5e-44
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 173 5e-44
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 173 7e-44
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 169 1e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 165 1e-41
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 163 8e-41
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 163 8e-41
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 98 2e-21
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 97 4e-21
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 97 6e-21
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 94 5e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 94 5e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 85 2e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 85 2e-17
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 55 2e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 55 2e-08
U29082-1|AAA68401.1| 251|Caenorhabditis elegans 2 (zwei) ig-dom... 28 3.9
AF456250-1|AAL59608.1| 251|Caenorhabditis elegans secreted 2-im... 28 3.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 3.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 3.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 3.9
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 27 6.8
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 27 9.0
AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal pro... 27 9.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 186 bits (454), Expect = 5e-48
Identities = 87/114 (76%), Positives = 94/114 (82%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
+HVPRAV+VDLEPTV+DE RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF P
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 186 bits (454), Expect = 5e-48
Identities = 87/114 (76%), Positives = 94/114 (82%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
+HVPRAV+VDLEPTV+DE RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 59 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 118
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF P
Sbjct: 119 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 172
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 169 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 214
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 186 bits (454), Expect = 5e-48
Identities = 87/114 (76%), Positives = 94/114 (82%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
+HVPRAV+VDLEPTV+DE RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF P
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 186 bits (454), Expect = 5e-48
Identities = 87/114 (76%), Positives = 94/114 (82%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
+HVPRAV+VDLEPTV+DE RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L L
Sbjct: 60 RHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTL 119
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF P
Sbjct: 120 DRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 170 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 215
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 177 bits (430), Expect = 4e-45
Identities = 80/114 (70%), Positives = 93/114 (81%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 99 bits (238), Expect = 8e-22
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 168 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 177 bits (430), Expect = 4e-45
Identities = 80/114 (70%), Positives = 93/114 (81%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 99 bits (238), Expect = 8e-22
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 168 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 177 bits (430), Expect = 4e-45
Identities = 80/114 (70%), Positives = 93/114 (81%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 97.9 bits (233), Expect = 3e-21
Identities = 43/46 (93%), Positives = 45/46 (97%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQV TAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 168 SIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 177 bits (430), Expect = 4e-45
Identities = 80/114 (70%), Positives = 93/114 (81%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VL
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 99 bits (238), Expect = 8e-22
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDICRR
Sbjct: 168 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 213
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 176 bits (428), Expect = 8e-45
Identities = 79/110 (71%), Positives = 91/110 (82%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
KHVPRA++VDLEPT +DE RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+ +V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEF 331
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEF 174
Score = 95.9 bits (228), Expect = 1e-20
Identities = 41/45 (91%), Positives = 45/45 (100%)
Frame = +3
Query: 336 IYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
IYPAPQVST++VEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 176 IYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 220
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 173 bits (421), Expect = 5e-44
Identities = 78/114 (68%), Positives = 91/114 (79%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ L
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDIC+R
Sbjct: 168 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKR 213
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 173 bits (421), Expect = 5e-44
Identities = 78/114 (68%), Positives = 91/114 (79%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
++VPR++ VDLEPTVVDE RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ L
Sbjct: 58 RYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF P
Sbjct: 118 DRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP 171
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQVSTAVVEPYNS+LTTHTTLEHSDCAFMVDNEAIYDIC+R
Sbjct: 168 SIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKR 213
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 173 bits (420), Expect = 7e-44
Identities = 77/114 (67%), Positives = 92/114 (80%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
KHVPRA+ VDLEPTV+DE RTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++ +V+
Sbjct: 60 KHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVM 119
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DR+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF P
Sbjct: 120 DRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYP 173
Score = 84.6 bits (200), Expect = 3e-17
Identities = 34/45 (75%), Positives = 44/45 (97%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICR 467
+IYPAPQ+ST++VEPYNS+LTTHTTLEHSDC+F++DNEAIY+I +
Sbjct: 170 SIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITK 214
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 169 bits (410), Expect = 1e-42
Identities = 75/114 (65%), Positives = 89/114 (78%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
+HVPR++ VDLEPTVVDE RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+ L
Sbjct: 57 RHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTL 116
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF P
Sbjct: 117 DRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYP 170
Score = 97.1 bits (231), Expect = 6e-21
Identities = 41/46 (89%), Positives = 46/46 (100%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
+IYPAPQ+ST+VVEPYNS+LTTHTTLEHSDC+FMVDNEAIYDICRR
Sbjct: 167 SIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRR 212
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 165 bits (401), Expect = 1e-41
Identities = 76/114 (66%), Positives = 87/114 (76%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
KHVPRA+ VDLEPTV+DE R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++ +VL
Sbjct: 63 KHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVL 122
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DRIRK + C GLQGFL+FH LLMERLSV++GKKSKLEF P
Sbjct: 123 DRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYP 176
Score = 90.2 bits (214), Expect = 6e-19
Identities = 38/46 (82%), Positives = 45/46 (97%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
++YPAPQVST+VVEPYNS+LTTHTTLE SDC+FMVDNEAIYD+CR+
Sbjct: 173 SVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQ 218
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 163 bits (395), Expect = 8e-41
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
KHVPR + VDLEPTVVDE RTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+
Sbjct: 66 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 125
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DR+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEF P
Sbjct: 126 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 179
Score = 94.7 bits (225), Expect = 3e-20
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
AIYPAPQVST++VEPYNS+L THTTLEHSDC FMVDNEAIYDICRR
Sbjct: 176 AIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRR 221
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 163 bits (395), Expect = 8e-41
Identities = 74/114 (64%), Positives = 88/114 (77%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
KHVPR + VDLEPTVVDE RTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+
Sbjct: 38 KHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVM 97
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
DR+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEF P
Sbjct: 98 DRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYP 151
Score = 94.7 bits (225), Expect = 3e-20
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
AIYPAPQVST++VEPYNS+L THTTLEHSDC FMVDNEAIYDICRR
Sbjct: 148 AIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRR 193
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 98.7 bits (235), Expect = 2e-21
Identities = 49/114 (42%), Positives = 67/114 (58%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRAVLVDLEP +D R+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D IRK A+ C LQGF + H LL+ ++ +Y + F +P
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
Score = 60.1 bits (139), Expect = 8e-10
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3
Query: 327 SSAIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
S ++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 166 SFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYR 213
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 98.3 bits (234), Expect = 2e-21
Identities = 48/114 (42%), Positives = 67/114 (58%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRAVLVDLEP +D R+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D +RK A+ C LQGF + H LL+ ++ +Y + F +P
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVP 171
Score = 60.9 bits (141), Expect = 5e-10
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 327 SSAIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
S ++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R
Sbjct: 166 SFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 213
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 97.5 bits (232), Expect = 4e-21
Identities = 47/114 (41%), Positives = 66/114 (57%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRA LVDLEP +D R G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D +RK A+ C LQGF + H LL+ ++ +Y + + F +P
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVP 171
Score = 60.1 bits (139), Expect = 8e-10
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R
Sbjct: 168 SVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 213
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 97.1 bits (231), Expect = 6e-21
Identities = 48/114 (42%), Positives = 67/114 (58%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRAVLVDLEP +D R+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D IRK A+ C LQGF + H LL+ ++ ++ + F +P
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVP 171
Score = 60.1 bits (139), Expect = 8e-10
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3
Query: 327 SSAIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
S ++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC R
Sbjct: 166 SFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYR 213
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 93.9 bits (223), Expect = 5e-20
Identities = 47/114 (41%), Positives = 66/114 (57%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRAVLVDLEP +D R+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D +RK A+ LQGF + H LL+ ++ +Y + F +P
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Score = 61.3 bits (142), Expect = 3e-10
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R
Sbjct: 168 SVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFR 213
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 93.9 bits (223), Expect = 5e-20
Identities = 47/114 (41%), Positives = 66/114 (57%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRAVLVDLEP +D R+G + QLF P+ + G+ A NN+A+GHYT G E+V VL
Sbjct: 58 KYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLP 343
D +RK A+ LQGF + H LL+ ++ +Y + F +P
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Score = 61.3 bits (142), Expect = 3e-10
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICRR 470
++ P+P+VS VVEPYN+ L+ H +E++D F +DNEA+YDIC R
Sbjct: 168 SVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFR 213
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 2e-17
Identities = 43/116 (37%), Positives = 65/116 (56%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRA+LVDL+P ++ R+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLPRA 349
IR+ A+ L+GF + H LL+ +L +Y K+ +P A
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA 173
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICR 467
+I P+ +VS VVEPYN++L+ +++ D F +DNEAI+DIC+
Sbjct: 168 SIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQ 212
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 85.0 bits (201), Expect = 2e-17
Identities = 43/116 (37%), Positives = 65/116 (56%)
Frame = +2
Query: 2 KHVPRAVLVDLEPTVVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVL 181
K+VPRA+LVDL+P ++ R+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 182 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKKSKLEFGHLPRA 349
IR+ A+ L+GF + H LL+ +L +Y K+ +P A
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSA 173
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +3
Query: 333 AIYPAPQVSTAVVEPYNSMLTTHTTLEHSDCAFMVDNEAIYDICR 467
+I P+ +VS VVEPYN++L+ +++ D F +DNEAI+DIC+
Sbjct: 168 SIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQ 212
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +2
Query: 5 HVPRAVLVDLEPTVVD-EARTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVYL 175
+VPRAVLVDLEP V++ ++ + LF+ + + A NN+A G Y G+E+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 176 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKK 316
++D I + A+ L G L H LL+ERL + KK
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKK 166
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 333 AIYPAPQVST-AVVEPYNSMLTTHTTLEHSDCAFMVDNEAIY 455
+++ ST VV PYN +L+ +E+ D ++DN A++
Sbjct: 172 SVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +2
Query: 5 HVPRAVLVDLEPTVVD-EARTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVYL 175
+VPRAVLVDLEP V++ ++ + LF+ + + A NN+A G Y G+E+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 176 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXYLLMERLSVDYGKK 316
++D I + A+ L G L H LL+ERL + KK
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKK 166
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 333 AIYPAPQVST-AVVEPYNSMLTTHTTLEHSDCAFMVDNEAIY 455
+++ ST VV PYN +L+ +E+ D ++DN A++
Sbjct: 172 SVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALH 213
>U29082-1|AAA68401.1| 251|Caenorhabditis elegans 2 (zwei) ig-domain
protein protein3 protein.
Length = 251
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 377 GLDDGSGNLRRGVDGRTPV*TSCRSQRRDAPSISK*TQSRY 255
G D + + V+G+T C+S RR AP I+ T+SR+
Sbjct: 133 GHDTVESSAKISVEGQT---VKCKSTRRSAPVITMSTESRF 170
>AF456250-1|AAL59608.1| 251|Caenorhabditis elegans secreted
2-immunoglobulin-domainprotein ZIG-3 protein.
Length = 251
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 377 GLDDGSGNLRRGVDGRTPV*TSCRSQRRDAPSISK*TQSRY 255
G D + + V+G+T C+S RR AP I+ T+SR+
Sbjct: 133 GHDTVESSAKISVEGQT---VKCKSTRRSAPVITMSTESRF 170
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 44 VVDEARTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVYLVLDR 187
VV + +TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 115 FLTSNKLFWMKQLSVCASAGLINNSRFKIDQD 20
FL K F K ++VC S LI R+ D+D
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 192 ASSLTSVPVCKDS*SSTPSVEVPALGSLTY*WSVSP 299
AS++ +P C+ P + SL+Y W++SP
Sbjct: 317 ASAVIEIPPCRHLVDDYSMCAPPPVSSLSYNWNLSP 352
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 192 ASSLTSVPVCKDS*SSTPSVEVPALGSLTY*WSVSP 299
AS++ +P C+ P + SL+Y W++SP
Sbjct: 317 ASAVIEIPPCRHLVDDYSMCAPPPVSSLSYNWNLSP 352
>AC025721-4|AAK29902.1| 187|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 17, isoform a protein.
Length = 187
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 375 ARRRQWKPEARGRWPNSSLDFL 310
A+ +QW +GRWP S DFL
Sbjct: 73 AQTKQWNT-TQGRWPVKSADFL 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,841,930
Number of Sequences: 27780
Number of extensions: 218154
Number of successful extensions: 541
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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