Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2253
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.7  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   4.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   4.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 275 HMSMLVQQHNETAGAAMVLV 216
           H+S LV+  NET G  ++L+
Sbjct: 511 HLSKLVKLFNETFGIVLLLM 530


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 275 HMSMLVQQHNETAGAAMVLV 216
           H+S LV+  NET G  ++L+
Sbjct: 236 HLSKLVKLFNETFGIVLLLM 255


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 442 WSPVSRVCRERW 407
           W PV R+C   W
Sbjct: 478 WMPVMRICVSAW 489


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 456 TPPTLHPQLRRTSAP 500
           +PP  H +LRR +AP
Sbjct: 209 SPPEKHLRLRRDTAP 223


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 387 PQPLMDHHLSRHTLLTGLQPSPNTPPTLHP 476
           P P      +R TL T     P+T PT  P
Sbjct: 160 PLPPTTSTTTRTTLTTKFTTKPSTKPTNKP 189


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 396 LMDHHLSRHTLLTGLQPSPNTPPTLHP 476
           L + H++    L GL  SP+    +HP
Sbjct: 25  LYEPHVAHRPGLQGLHHSPHLNHAMHP 51


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 400 WITIFRDILCSRGSSHRRILRPRYTR 477
           W++ F  ++C      RR  R  YTR
Sbjct: 141 WMSPFDRVVCGPNGCPRRRGRQTYTR 166


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 400 WITIFRDILCSRGSSHRRILRPRYTR 477
           W++ F  ++C      RR  R  YTR
Sbjct: 200 WMSPFDRVVCGPNGCPRRRGRQTYTR 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,326
Number of Sequences: 336
Number of extensions: 1960
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)