BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2251
(562 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p pro... 62 7e-10
AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA... 62 7e-10
BT009951-1|AAQ22420.1| 295|Drosophila melanogaster RH51767p pro... 44 1e-04
AE014297-425|AAF51897.2| 295|Drosophila melanogaster CG1154-PA ... 44 1e-04
AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p pro... 34 0.11
AF231039-1|AAF34808.1| 268|Drosophila melanogaster SP558 protei... 34 0.11
AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA ... 34 0.11
AE014297-432|AAN13237.1| 278|Drosophila melanogaster CG31561-PA... 33 0.20
BT003530-1|AAO39534.1| 674|Drosophila melanogaster RE12147p pro... 29 4.3
BT001377-1|AAN71132.1| 248|Drosophila melanogaster GH01987p pro... 29 4.3
AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p pro... 29 4.3
AY058606-1|AAL13835.1| 543|Drosophila melanogaster LD29875p pro... 29 4.3
AF216663-1|AAF32293.1| 2263|Drosophila melanogaster guanine-nucl... 29 4.3
AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family g... 29 4.3
AE014298-1633|AAF48053.2| 784|Drosophila melanogaster CG32666-P... 29 4.3
AE014298-1632|AAS65317.1| 784|Drosophila melanogaster CG32666-P... 29 4.3
AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE... 29 4.3
AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF... 29 4.3
AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB... 29 4.3
AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD... 29 4.3
AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC... 29 4.3
AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA... 29 4.3
AE013599-2630|AAF57741.1| 543|Drosophila melanogaster CG5742-PA... 29 4.3
AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein. 29 4.3
AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p pro... 28 7.5
AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA... 28 7.5
AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-P... 28 9.9
>AY070617-1|AAL48088.1| 233|Drosophila melanogaster RE71995p
protein.
Length = 233
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQGSPRSARSFEP--LPDEPRARENQVDLRLL 314
C+KE+AL Y + + + ++ L +G++L+ RS LP+E ARE +VD L+
Sbjct: 43 CMKERALHYFD--AENGDVRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLV 100
Query: 315 DGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
+ VA F +Q ++PK +I+ +R+LEE RG
Sbjct: 101 ERVARFFGTHTLQFKVPKDSIQDMQRALEESRG 133
>AE014297-421|AAF51900.1| 233|Drosophila melanogaster CG15592-PA
protein.
Length = 233
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQGSPRSARSFEP--LPDEPRARENQVDLRLL 314
C+KE+AL Y + + + ++ L +G++L+ RS LP+E ARE +VD L+
Sbjct: 43 CMKERALHYFD--AENGDVRLTEGIALVKTDEIPVGRSLNEMQLPEEVEAREAEVDSLLV 100
Query: 315 DGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
+ VA F +Q ++PK +I+ +R+LEE RG
Sbjct: 101 ERVARFFGTHTLQFKVPKDSIQDMQRALEESRG 133
>BT009951-1|AAQ22420.1| 295|Drosophila melanogaster RH51767p
protein.
Length = 295
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIG-QGSPRSARSFE-----PLPDEPRARENQVD 302
C+K+KA+ +++ ++ +N+ +G+ L+ + +PR + E LP R+ ++
Sbjct: 65 CLKKKAISFIDRLAPIDAINVAEGIKLVRLETAPRPPATSENELESSLPRSGSDRDAKLT 124
Query: 303 LRLLDGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
L++ ++ F +Q+ PK + R LEEGRG
Sbjct: 125 NMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEEGRG 161
>AE014297-425|AAF51897.2| 295|Drosophila melanogaster CG1154-PA
protein.
Length = 295
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIG-QGSPRSARSFE-----PLPDEPRARENQVD 302
C+K+KA+ +++ ++ +N+ +G+ L+ + +PR + E LP R+ ++
Sbjct: 65 CLKKKAISFIDRLAPIDAINVAEGIKLVRLETAPRPPATSENELESSLPRSGSDRDAKLT 124
Query: 303 LRLLDGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
L++ ++ F +Q+ PK + R LEEGRG
Sbjct: 125 NMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEEGRG 161
>AY058538-1|AAL13767.1| 268|Drosophila melanogaster LD24139p
protein.
Length = 268
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQ-GSP--RSARS------FEPLPDEPRAREN 293
C+ K + + + S + L GV+ SP R+ +S + LP R
Sbjct: 53 CLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVYAELPQNADERTG 112
Query: 294 QVDLRLLDGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
++ + ADFL ++ +LP + R+L+EGRG
Sbjct: 113 RLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRG 152
>AF231039-1|AAF34808.1| 268|Drosophila melanogaster SP558 protein
protein.
Length = 268
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQ-GSP--RSARS------FEPLPDEPRAREN 293
C+ K + + + S + L GV+ SP R+ +S + LP R
Sbjct: 53 CLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVYAELPQNADERTR 112
Query: 294 QVDLRLLDGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
++ + ADFL ++ +LP + R+L+EGRG
Sbjct: 113 RLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRG 152
>AE014297-430|AAF51893.1| 268|Drosophila melanogaster CG1155-PA
protein.
Length = 268
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQ-GSP--RSARS------FEPLPDEPRAREN 293
C+ K + + + S + L GV+ SP R+ +S + LP R
Sbjct: 53 CLAVKGITALNRAARSNNIELASGVTFQRDPASPVSRTGKSMSEQDVYAELPQNADERTG 112
Query: 294 QVDLRLLDGVADFLENFVIQIRLPKGAIESAKRSLEEGRG 413
++ + ADFL ++ +LP + R+L+EGRG
Sbjct: 113 RLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRG 152
>AE014297-432|AAN13237.1| 278|Drosophila melanogaster CG31561-PA
protein.
Length = 278
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQGSPRSARSFEPLPDEPRARENQVDLRLLDG 320
C+K + ++ +E ++ ELN++ G+S++ + ++ E + + R+ + RL
Sbjct: 63 CLKIEFVKIMEKLAEQEELNVLPGISVVKDENATELKTSELMAEVARSYPSDPSTRLNGY 122
Query: 321 VADFLENFVIQIRLPKGAIESAKRSLEEGR 410
+ LEN +++ R + + K SL EGR
Sbjct: 123 IVAKLEN-LLRTRFLRFRLLDDK-SLVEGR 150
>BT003530-1|AAO39534.1| 674|Drosophila melanogaster RE12147p
protein.
Length = 674
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 137 RRCHRSKFSALPSLIGRRLRHYSLRPQRILL 45
R C R AL L R + H L+PQ ILL
Sbjct: 138 RHCMREVLKALKFLHDRSIAHLDLKPQNILL 168
>BT001377-1|AAN71132.1| 248|Drosophila melanogaster GH01987p
protein.
Length = 248
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 187 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 228
>AY070715-1|AAL48186.1| 654|Drosophila melanogaster SD08659p
protein.
Length = 654
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 384 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 425
>AY058606-1|AAL13835.1| 543|Drosophila melanogaster LD29875p
protein.
Length = 543
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 401 RRSR*EEEVEATPAHTGTPATEDPVPHPRLPRNHCLCPP 517
RRS + ATP T TP + + P LPR L P
Sbjct: 378 RRSSLGSQHTATPPETNTPTAPNGISLPELPRRSSLQAP 416
>AF216663-1|AAF32293.1| 2263|Drosophila melanogaster
guanine-nucleotide-exchange-factorTRIO protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 1993 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 2034
>AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family
guanine nucleotideexchange factor Trio protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 1993 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 2034
>AE014298-1633|AAF48053.2| 784|Drosophila melanogaster CG32666-PB,
isoform B protein.
Length = 784
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 137 RRCHRSKFSALPSLIGRRLRHYSLRPQRILL 45
R C R AL L R + H L+PQ ILL
Sbjct: 138 RHCMREVLKALKFLHDRSIAHLDLKPQNILL 168
>AE014298-1632|AAS65317.1| 784|Drosophila melanogaster CG32666-PA,
isoform A protein.
Length = 784
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 137 RRCHRSKFSALPSLIGRRLRHYSLRPQRILL 45
R C R AL L R + H L+PQ ILL
Sbjct: 138 RHCMREVLKALKFLHDRSIAHLDLKPQNILL 168
>AE014296-169|AAN11457.1| 398|Drosophila melanogaster CG18214-PE,
isoform E protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 128 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 169
>AE014296-168|AAS64926.1| 658|Drosophila melanogaster CG18214-PF,
isoform F protein.
Length = 658
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 388 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 429
>AE014296-167|AAF47435.3| 658|Drosophila melanogaster CG18214-PB,
isoform B protein.
Length = 658
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 388 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 429
>AE014296-166|AAN11456.1| 804|Drosophila melanogaster CG18214-PD,
isoform D protein.
Length = 804
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 534 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 575
>AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC,
isoform C protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 1993 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 2034
>AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA,
isoform A protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 1993 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 2034
>AE013599-2630|AAF57741.1| 543|Drosophila melanogaster CG5742-PA
protein.
Length = 543
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 401 RRSR*EEEVEATPAHTGTPATEDPVPHPRLPRNHCLCPP 517
RRS + ATP T TP + + P LPR L P
Sbjct: 378 RRSSLGSQHTATPPETNTPTAPNGISLPELPRRSSLQAP 416
>AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.
Length = 2263
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 194 FSRIRDIFHVSQSFFLDTMRRCHRSKFSALPSLIGRRLRHYSL 66
F+ I+DI+ + FFL +R C +S + L LI R ++L
Sbjct: 1993 FNNIKDIYEWHRDFFLRALRNCQKSP-ADLGPLIKRSATKFAL 2034
>AY071052-1|AAL48674.1| 280|Drosophila melanogaster RE13893p
protein.
Length = 280
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 138 HCVKEKALRYVENVSNSRE 194
HC+KEK L Y++ V+N E
Sbjct: 57 HCLKEKVLTYLDTVANVEE 75
>AE014297-438|AAF54138.1| 280|Drosophila melanogaster CG15188-PA
protein.
Length = 280
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 138 HCVKEKALRYVENVSNSRE 194
HC+KEK L Y++ V+N E
Sbjct: 57 HCLKEKVLTYLDTVANVEE 75
>AE014134-2062|AAF53094.1| 282|Drosophila melanogaster CG14925-PA
protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 141 CVKEKALRYVENVSNSRELNLIDGVSLIGQGSPRSARSFEPLPDEPR-ARENQVDLRLLD 317
C+K+KAL + + + ++DG++L Q + L D + + +D LL
Sbjct: 70 CLKQKALHALSRALDQDSIKIVDGLALEKQNQSETESILGSLTDARQFGNLSPIDRALLS 129
Query: 318 GVADFLENFVIQIRLPKGAIESA 386
+ ++I + G E +
Sbjct: 130 KADKLMRTHTLKIDMDVGGGEDS 152
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,597,857
Number of Sequences: 53049
Number of extensions: 493829
Number of successful extensions: 1810
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1806
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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