Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2251
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z81058-8|CAB02923.1|  442|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ...    28   5.3  
AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical ...    28   5.3  
Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    27   9.2  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    27   9.2  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     27   9.2  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    27   9.2  

>Z68316-6|CAA92682.2|  357|Caenorhabditis elegans Hypothetical
           protein K08E4.5 protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -2

Query: 414 YRD---LLPRIASQIQWHPSADVSE*QSSPRNRQLRPK 310
           YRD   LLP I+S + W+P++D+S   S   N    P+
Sbjct: 283 YRDIICLLPYISSSLTWYPASDLSAFWSLHENHSESPE 320


>Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical
           protein C08F8.2b protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 192 ELNLID-GVSLIGQGSPRSARSFEPLPDEPRARE--NQVDLRLLDGVADFL 335
           EL+L++    ++ Q    S R  + LPDEPR RE    +D  + +GV  F+
Sbjct: 602 ELSLLEQNYEILDQYMWLSMRFPDMLPDEPRVREASKHLDSMIQEGVESFM 652


>Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical
           protein C08F8.2a protein.
          Length = 721

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 192 ELNLID-GVSLIGQGSPRSARSFEPLPDEPRARE--NQVDLRLLDGVADFL 335
           EL+L++    ++ Q    S R  + LPDEPR RE    +D  + +GV  F+
Sbjct: 604 ELSLLEQNYEILDQYMWLSMRFPDMLPDEPRVREASKHLDSMIQEGVESFM 654


>Z81058-8|CAB02923.1|  442|Caenorhabditis elegans Hypothetical
           protein F11E6.8 protein.
          Length = 442

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
 Frame = -3

Query: 371 TLRQTYLNDKVLQEIGNSVQKSEVYLILPGSGLVG*RLEGPG----*SRGALTDQTD--- 213
           T+  TY    +LQ IG+ +++S   L+LP   +V   + G G      RG + D      
Sbjct: 104 TVSSTYSTQSLLQLIGSDLRQSLQGLLLPSEAVVLETIVGKGYFGNVYRGRMRDPAGRLI 163

Query: 212 --AID*VEFSRIRDIFHVSQ 159
             A+  ++  R RDI H+ +
Sbjct: 164 PVAVKTLKGERARDIAHIEK 183


>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
           protein F28B3.1 protein.
          Length = 1539

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = +2

Query: 245 SQVLRAFTRRAQSQGESSRPQTFGRSCRFLGELCHSDTSAEGCH*ICEAILGRRSR*EEE 424
           S  LR  TR  +    SS P  F +  R L    H +  A+  H   +A+  +  + +++
Sbjct: 13  SMALRK-TRYLRQTVSSSGPSIFNQHSRKLSSENHKEYLAQ-LH-SRKAVSLKEKKVKQQ 69

Query: 425 VEATPAH-TGTPATEDPVP-HPRLPRNHCLCPPS 520
             A   + + +P++   +P  P +PR H +C PS
Sbjct: 70  RSAEEGYASSSPSSASLIPSRPPIPRYHHVCEPS 103


>AC006607-6|AAF60370.2|  496|Caenorhabditis elegans Hypothetical
           protein C09E7.5 protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 18/66 (27%), Positives = 34/66 (51%)
 Frame = +3

Query: 114 KLAPMTTSHCVKEKALRYVENVSNSRELNLIDGVSLIGQGSPRSARSFEPLPDEPRAREN 293
           +L  +T +  ++  AL  +EN   + + N ++ V    Q   R++   EPLP+EP+  + 
Sbjct: 328 ELIALTRTAKIQRFALLELENYKTNID-NYLETVETNIQKVKRNSLDLEPLPEEPKISDK 386

Query: 294 QVDLRL 311
            + L L
Sbjct: 387 FMRLYL 392


>Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical
           protein F25H8.5c protein.
          Length = 732

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 470 PVPHPRLPRNHCLCPP 517
           P P P  PRN+CL PP
Sbjct: 90  PTPGPPPPRNNCLPPP 105


>Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical
           protein F25H8.5b protein.
          Length = 369

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 470 PVPHPRLPRNHCLCPP 517
           P P P  PRN+CL PP
Sbjct: 90  PTPGPPPPRNNCLPPP 105


>Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical
           protein F25H8.5a protein.
          Length = 780

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 470 PVPHPRLPRNHCLCPP 517
           P P P  PRN+CL PP
Sbjct: 90  PTPGPPPPRNNCLPPP 105


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 419 EEVEATPAHTGTPATEDPVPHPRLPRN 499
           ++ EA+ +    PATED +P  RLP N
Sbjct: 706 KKTEASQSDKVKPATEDELPPARLPDN 732


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 419 EEVEATPAHTGTPATEDPVPHPRLPRN 499
           ++ EA+ +    PATED +P  RLP N
Sbjct: 706 KKTEASQSDKVKPATEDELPPARLPDN 732


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 419 EEVEATPAHTGTPATEDPVPHPRLPRN 499
           ++ EA+ +    PATED +P  RLP N
Sbjct: 706 KKTEASQSDKVKPATEDELPPARLPDN 732


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 419 EEVEATPAHTGTPATEDPVPHPRLPRN 499
           ++ EA+ +    PATED +P  RLP N
Sbjct: 706 KKTEASQSDKVKPATEDELPPARLPDN 732


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,899,239
Number of Sequences: 27780
Number of extensions: 244466
Number of successful extensions: 777
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)