Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2249
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   0.21 
AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione S-tran...    26   1.1  
AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione S-tran...    26   1.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   6.0  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   7.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
 Frame = +2

Query: 89   LRELDKYETMPEDVGHCFVTWAREFDMYVSYCRNKPDSNAAVVQHAGDYFERVQRKKKLE 268
            LR++    +  E   H F     + DM ++Y  N      A         E  +  KK+E
Sbjct: 693  LRDISAEVSKIEKTAHRFGQLKEQHDM-LNYELNNLKQRLAQTSFQQTKEEIEELNKKIE 751

Query: 269  HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQG----EIKDGLEVMLSVPKKANDA 424
              L   +++  +  T+    +KDLQA  A+G+G    E+K   E +    KK+ ++
Sbjct: 752  -TLQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEES 806


>AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione
           S-transferase D1-3 protein.
          Length = 218

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -1

Query: 355 STACLKILQQQLILGNPLNR--FDQISGEWMLEFFLSLHPLKVIAGVLDDSRIAVW 194
           S  C  +      +G  LN    D + GE M   FL L+P   I  ++D+    +W
Sbjct: 9   SAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDEDGFVLW 64


>AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -1

Query: 355 STACLKILQQQLILGNPLNR--FDQISGEWMLEFFLSLHPLKVIAGVLDDSRIAVW 194
           S  C  +      +G  LN    D + GE M   FL L+P   I  ++D+    +W
Sbjct: 9   SAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLNPQHCIPTLVDEDGFVLW 64


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 150 QVTKQWPTSSGIVSYLSNSLRKTRS 76
           +VTK W + S +V+ L NS++   S
Sbjct: 590 KVTKYWQSLSNLVASLLNSIQSIAS 614


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/73 (21%), Positives = 30/73 (41%)
 Frame = +1

Query: 76  RARFPQRIGQIRDDAGRRRPLLRDLGARVRYVRVVLSQQARQQCGCRPTRRRLL*EGATK 255
           R +    I ++++     R   RDL  ++   +    +  RQ+  C+    RL+     K
Sbjct: 635 RGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEK 694

Query: 256 EKTRASTRRLFDQ 294
            K   S R + +Q
Sbjct: 695 VKFERSCRTIIEQ 707


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 508 GTFVRSSKRDARGESSFRLASGFLAKEVKDSH 603
           G  V    +DA G  S+  +S F  K+++DS+
Sbjct: 547 GQSVPDFLKDAGGSGSYMGSSQFGGKDIRDSY 578


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 513 GPTRERSP--WRTTSPRLSVGTSHPSSRERCIA 421
           G +R++ P      +PR  V   HP S+ER +A
Sbjct: 107 GSSRKQKPVLMMDGAPRSVVKAKHPKSQERKVA 139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,693
Number of Sequences: 2352
Number of extensions: 14731
Number of successful extensions: 45
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)