Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2249
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 130 8e-31
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 130 8e-31
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 130 8e-31
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 130 8e-31
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 130 8e-31
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 106 1e-23
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 106 1e-23
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 106 1e-23
U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily ass... 73 2e-13
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 73 2e-13
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 56 2e-08
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 48 5e-06
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 48 5e-06
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 48 5e-06
Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine n... 39 0.003
AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho ... 39 0.003
AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-... 39 0.003
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 35 0.041
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 33 0.13
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 33 0.22
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 33 0.22
AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical ... 29 2.0
U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 28 4.7
AF106583-5|AAD03136.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 8.2
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 27 8.2
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 27 8.2
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 27 8.2
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 8.2
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 8.2
AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical ... 27 8.2
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 130 bits (314), Expect = 8e-31
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYCRNKPDSNAAVV 217
IFGNIE+I +FH L EL KYE PE VG F+ W ++Y YC NK N +
Sbjct: 1254 IFGNIEKIFKFHNDKLLHELIKYENQPEAVGASFIVWIDLLNELYTEYCVNKEQKNHVIA 1313
Query: 218 Q-HAGDYFERVQRKKKLE--HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLE 388
A +F ++ + LE + +A+ LIKPVQRIT+Y+LL++ L C + ++K+ E
Sbjct: 1314 TPDAVSFFTGIRERHGLEINNEIASLLIKPVQRITRYRLLIEQLMRSCTDKTNDLKEAYE 1373
Query: 389 VMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLLSRVGPSSDHQ-KGTREESLLFDL 565
V+ SVP+K ND +H + L+ D D LG V Q L+ P + + +G + LFD+
Sbjct: 1374 VVCSVPRKVNDLIHYNCLDLKDFKVDELGPFVTQDTLTFWEPRAYFKGRGKERQVFLFDI 1433
Query: 566 HLAFWRK 586
+ F ++
Sbjct: 1434 SIVFAKR 1440
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 130 bits (314), Expect = 8e-31
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYCRNKPDSNAAVV 217
IFGNIE+I +FH L EL KYE PE VG F+ W ++Y YC NK N +
Sbjct: 1254 IFGNIEKIFKFHNDKLLHELIKYENQPEAVGASFIVWIDLLNELYTEYCVNKEQKNHVIA 1313
Query: 218 Q-HAGDYFERVQRKKKLE--HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLE 388
A +F ++ + LE + +A+ LIKPVQRIT+Y+LL++ L C + ++K+ E
Sbjct: 1314 TPDAVSFFTGIRERHGLEINNEIASLLIKPVQRITRYRLLIEQLMRSCTDKTNDLKEAYE 1373
Query: 389 VMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLLSRVGPSSDHQ-KGTREESLLFDL 565
V+ SVP+K ND +H + L+ D D LG V Q L+ P + + +G + LFD+
Sbjct: 1374 VVCSVPRKVNDLIHYNCLDLKDFKVDELGPFVTQDTLTFWEPRAYFKGRGKERQVFLFDI 1433
Query: 566 HLAFWRK 586
+ F ++
Sbjct: 1434 SIVFAKR 1440
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 1844 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 1903
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 1904 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 1962
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 1963 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 2012
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 130 bits (314), Expect = 8e-31
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYCRNKPDSNAAVV 217
IFGNIE+I +FH L EL KYE PE VG F+ W ++Y YC NK N +
Sbjct: 1254 IFGNIEKIFKFHNDKLLHELIKYENQPEAVGASFIVWIDLLNELYTEYCVNKEQKNHVIA 1313
Query: 218 Q-HAGDYFERVQRKKKLE--HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLE 388
A +F ++ + LE + +A+ LIKPVQRIT+Y+LL++ L C + ++K+ E
Sbjct: 1314 TPDAVSFFTGIRERHGLEINNEIASLLIKPVQRITRYRLLIEQLMRSCTDKTNDLKEAYE 1373
Query: 389 VMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLLSRVGPSSDHQ-KGTREESLLFDL 565
V+ SVP+K ND +H + L+ D D LG V Q L+ P + + +G + LFD+
Sbjct: 1374 VVCSVPRKVNDLIHYNCLDLKDFKVDELGPFVTQDTLTFWEPRAYFKGRGKERQVFLFDI 1433
Query: 566 HLAFWRK 586
+ F ++
Sbjct: 1434 SIVFAKR 1440
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 1844 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 1903
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 1904 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 1962
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 1963 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 2012
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 130 bits (314), Expect = 8e-31
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYCRNKPDSNAAVV 217
IFGNIE+I +FH L EL KYE PE VG F+ W ++Y YC NK N +
Sbjct: 1254 IFGNIEKIFKFHNDKLLHELIKYENQPEAVGASFIVWIDLLNELYTEYCVNKEQKNHVIA 1313
Query: 218 Q-HAGDYFERVQRKKKLE--HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLE 388
A +F ++ + LE + +A+ LIKPVQRIT+Y+LL++ L C + ++K+ E
Sbjct: 1314 TPDAVSFFTGIRERHGLEINNEIASLLIKPVQRITRYRLLIEQLMRSCTDKTNDLKEAYE 1373
Query: 389 VMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLLSRVGPSSDHQ-KGTREESLLFDL 565
V+ SVP+K ND +H + L+ D D LG V Q L+ P + + +G + LFD+
Sbjct: 1374 VVCSVPRKVNDLIHYNCLDLKDFKVDELGPFVTQDTLTFWEPRAYFKGRGKERQVFLFDI 1433
Query: 566 HLAFWRK 586
+ F ++
Sbjct: 1434 SIVFAKR 1440
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 130 bits (314), Expect = 8e-31
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYCRNKPDSNAAVV 217
IFGNIE+I +FH L EL KYE PE VG F+ W ++Y YC NK N +
Sbjct: 1254 IFGNIEKIFKFHNDKLLHELIKYENQPEAVGASFIVWIDLLNELYTEYCVNKEQKNHVIA 1313
Query: 218 Q-HAGDYFERVQRKKKLE--HPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLE 388
A +F ++ + LE + +A+ LIKPVQRIT+Y+LL++ L C + ++K+ E
Sbjct: 1314 TPDAVSFFTGIRERHGLEINNEIASLLIKPVQRITRYRLLIEQLMRSCTDKTNDLKEAYE 1373
Query: 389 VMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLLSRVGPSSDHQ-KGTREESLLFDL 565
V+ SVP+K ND +H + L+ D D LG V Q L+ P + + +G + LFD+
Sbjct: 1374 VVCSVPRKVNDLIHYNCLDLKDFKVDELGPFVTQDTLTFWEPRAYFKGRGKERQVFLFDI 1433
Query: 566 HLAFWRK 586
+ F ++
Sbjct: 1434 SIVFAKR 1440
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 1844 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 1903
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 1904 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 1962
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 1963 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 2012
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 198 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 257
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 258 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 316
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 317 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 366
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 279 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 338
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 339 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 397
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 398 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 447
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 106 bits (255), Expect = 1e-23
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Frame = +2
Query: 8 VPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREF-DMYVSYC 184
+P L GK+ +IF NI I FH+ FL+E++K E G FV + R +YV+YC
Sbjct: 284 LPADLVGKDKIIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFVKYERRLHTLYVTYC 343
Query: 185 RNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAA--YLIKPVQRITKYQLLLKDLQACCAE 358
+NKP S+ + Q + F K KL H +A LIKPVQRI KYQLLLKD+
Sbjct: 344 QNKPKSDYLLAQDDFEAF-FADTKAKLGHKVALCDLLIKPVQRIMKYQLLLKDILKFTER 402
Query: 359 GQGE---IKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQGLL 499
+ + +K L+VM VPK +D M + L+ D + G+++ QG L
Sbjct: 403 AKDKTDTLKKALQVMHVVPKACDDMMQVGRLQNFDKSLSAQGKLIHQGTL 452
>U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform a protein.
Length = 462
Score = 72.9 bits (171), Expect = 2e-13
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Frame = +2
Query: 5 SVPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREFDMYVSY- 181
S+P L+GK D +FGN+ E+++FH R L +L + E C V +YV+Y
Sbjct: 103 SLPDTLRGKPDCLFGNVRELYKFHHRTVLEDLVAARSTAE---MCRVLMQHRNQIYVTYR 159
Query: 182 --CRNKPDSNAAVVQHAGD--YFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKD-LQA 346
C+ SN V + +F+ QR +++YL+KP+QRI KYQLLL + +
Sbjct: 160 TYCQIH-GSNQKVRDSVKNHPFFKECQRNANHNMDMSSYLLKPIQRIMKYQLLLGNIMDD 218
Query: 347 CCAEGQGEIKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQ 490
C A+ + E+ + M+ + + + +M + G + SLG + LQ
Sbjct: 219 CPADVRDEVAMTRDSMVELLNQIDASMQQLHISGYNGDLKSLGLLRLQ 266
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 72.9 bits (171), Expect = 2e-13
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Frame = +2
Query: 5 SVPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREFDMYVSY- 181
S+P L+GK D +FGN+ E+++FH R L +L + E C V +YV+Y
Sbjct: 279 SLPDTLRGKPDCLFGNVRELYKFHHRTVLEDLVAARSTAE---MCRVLMQHRNQIYVTYR 335
Query: 182 --CRNKPDSNAAVVQHAGD--YFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKD-LQA 346
C+ SN V + +F+ QR +++YL+KP+QRI KYQLLL + +
Sbjct: 336 TYCQIH-GSNQKVRDSVKNHPFFKECQRNANHNMDMSSYLLKPIQRIMKYQLLLGNIMDD 394
Query: 347 CCAEGQGEIKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQ 490
C A+ + E+ + M+ + + + +M + G + SLG + LQ
Sbjct: 395 CPADVRDEVAMTRDSMVELLNQIDASMQQLHISGYNGDLKSLGLLRLQ 442
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 56.0 bits (129), Expect = 2e-08
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREFDMYVSYCRN--KPDSNAAV 214
+FG IE I F+++++ +LD + + CFV + +F+ Y+ YC N + S
Sbjct: 270 LFGCIERIFAFNKQLY-NQLDAADLDCVKMSRCFVESSGKFEDYIEYCTNYHRMMSTLYH 328
Query: 215 VQHAGDYFERVQ-RKKKLEHPL--AAYLIKPVQRITKYQLLLKDL-----QACCAEGQGE 370
+Q +Q R+ L H L +AYL+KPVQRI KY L L+++ E +
Sbjct: 329 LQQQPLVARALQERQLALNHSLQLSAYLLKPVQRILKYHLFLENILKNMPSTTHPEELIQ 388
Query: 371 IKDGLEVMLSVPKKAND 421
+K EVM S + ND
Sbjct: 389 VKRAHEVMTSQAARIND 405
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Frame = +2
Query: 35 DLIFGNIEEIHRFHERVFL------------------RELDKYETMPEDVGHCFVTWARE 160
++IFGNIEEI+ H + R + E +P+ +G F+ + +
Sbjct: 249 NIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTIGEVFIKYRDQ 308
Query: 161 FDMYVSYCRNKPDSN--AAVVQHAGDYFER----VQRKKKLEHPLAAYLIKPVQRITKYQ 322
F Y YC N PDS + + ++ R + + + + L P QR+TKY
Sbjct: 309 FLAYGKYCSNLPDSRKLSNELLKTNEFISRNINELTAQGNCKFGMNDLLCVPFQRLTKYP 368
Query: 323 LLLKDLQA---CCAEGQGEIKDGLEVMLSVPKKAND 421
LLLK+LQ + + +++ +EVM V N+
Sbjct: 369 LLLKELQKKTDLASPDRKSLEEAVEVMEDVCNYINE 404
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Frame = +2
Query: 35 DLIFGNIEEIHRFHERVFL------------------RELDKYETMPEDVGHCFVTWARE 160
++IFGNIEEI+ H + R + E +P+ +G F+ + +
Sbjct: 281 NIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTIGEVFIKYRDQ 340
Query: 161 FDMYVSYCRNKPDSN--AAVVQHAGDYFER----VQRKKKLEHPLAAYLIKPVQRITKYQ 322
F Y YC N PDS + + ++ R + + + + L P QR+TKY
Sbjct: 341 FLAYGKYCSNLPDSRKLSNELLKTNEFISRNINELTAQGNCKFGMNDLLCVPFQRLTKYP 400
Query: 323 LLLKDLQA---CCAEGQGEIKDGLEVMLSVPKKAND 421
LLLK+LQ + + +++ +EVM V N+
Sbjct: 401 LLLKELQKKTDLASPDRKSLEEAVEVMEDVCNYINE 436
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 48.0 bits (109), Expect = 5e-06
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Frame = +2
Query: 35 DLIFGNIEEIHRFHERVFL------------------RELDKYETMPEDVGHCFVTWARE 160
++IFGNIEEI+ H + R + E +P+ +G F+ + +
Sbjct: 281 NIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTIGEVFIKYRDQ 340
Query: 161 FDMYVSYCRNKPDSN--AAVVQHAGDYFER----VQRKKKLEHPLAAYLIKPVQRITKYQ 322
F Y YC N PDS + + ++ R + + + + L P QR+TKY
Sbjct: 341 FLAYGKYCSNLPDSRKLSNELLKTNEFISRNINELTAQGNCKFGMNDLLCVPFQRLTKYP 400
Query: 323 LLLKDLQA---CCAEGQGEIKDGLEVMLSVPKKAND 421
LLLK+LQ + + +++ +EVM V N+
Sbjct: 401 LLLKELQKKTDLASPDRKSLEEAVEVMEDVCNYINE 436
>Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical
protein C33D9.1b protein.
Length = 826
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLREL-----DKYETMPEDVGHCFVTWAREFDMYVSYCRN----- 190
+ N+ +++FH FL +L D + T + + + A MY Y N
Sbjct: 341 LLANVSSLYQFHNTHFLPQLLESIRDWHTT--KRIANVVRKQAPFLKMYSEYTNNYDRAT 398
Query: 191 KPDSNAAVVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQACCAEGQG 367
K + D + ++++ + E PL +LI PVQR+ +YQLLL++ +
Sbjct: 399 KLFEELKKKKKFADVVKEIEKQAECEGLPLGHHLICPVQRVMRYQLLLQEYKKHLQPSDV 458
Query: 368 EIKD---GLEVMLSVPKKANDAM 427
+ D LE++L AN+ M
Sbjct: 459 DFDDTTVALELVLQAAAHANEMM 481
>Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical
protein C33D9.1a protein.
Length = 844
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLREL-----DKYETMPEDVGHCFVTWAREFDMYVSYCRN----- 190
+ N+ +++FH FL +L D + T + + + A MY Y N
Sbjct: 341 LLANVSSLYQFHNTHFLPQLLESIRDWHTT--KRIANVVRKQAPFLKMYSEYTNNYDRAT 398
Query: 191 KPDSNAAVVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQACCAEGQG 367
K + D + ++++ + E PL +LI PVQR+ +YQLLL++ +
Sbjct: 399 KLFEELKKKKKFADVVKEIEKQAECEGLPLGHHLICPVQRVMRYQLLLQEYKKHLQPSDV 458
Query: 368 EIKD---GLEVMLSVPKKANDAM 427
+ D LE++L AN+ M
Sbjct: 459 DFDDTTVALELVLQAAAHANEMM 481
>AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine
nucleotide exchangefactor FGD-1 protein.
Length = 826
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLREL-----DKYETMPEDVGHCFVTWAREFDMYVSYCRN----- 190
+ N+ +++FH FL +L D + T + + + A MY Y N
Sbjct: 341 LLANVSSLYQFHNTHFLPQLLESIRDWHTT--KRIANVVRKQAPFLKMYSEYTNNYDRAT 398
Query: 191 KPDSNAAVVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQACCAEGQG 367
K + D + ++++ + E PL +LI PVQR+ +YQLLL++ +
Sbjct: 399 KLFEELKKKKKFADVVKEIEKQAECEGLPLGHHLICPVQRVMRYQLLLQEYKKHLQPSDV 458
Query: 368 EIKD---GLEVMLSVPKKANDAM 427
+ D LE++L AN+ M
Sbjct: 459 DFDDTTVALELVLQAAAHANEMM 481
>AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho
guanine nucleotideexchange factor FGD-1 protein.
Length = 844
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLREL-----DKYETMPEDVGHCFVTWAREFDMYVSYCRN----- 190
+ N+ +++FH FL +L D + T + + + A MY Y N
Sbjct: 341 LLANVSSLYQFHNTHFLPQLLESIRDWHTT--KRIANVVRKQAPFLKMYSEYTNNYDRAT 398
Query: 191 KPDSNAAVVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQACCAEGQG 367
K + D + ++++ + E PL +LI PVQR+ +YQLLL++ +
Sbjct: 399 KLFEELKKKKKFADVVKEIEKQAECEGLPLGHHLICPVQRVMRYQLLLQEYKKHLQPSDV 458
Query: 368 EIKD---GLEVMLSVPKKANDAM 427
+ D LE++L AN+ M
Sbjct: 459 DFDDTTVALELVLQAAAHANEMM 481
>AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-GTP
exchange factor protein.
Length = 826
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLREL-----DKYETMPEDVGHCFVTWAREFDMYVSYCRN----- 190
+ N+ +++FH FL +L D + T + + + A MY Y N
Sbjct: 341 LLANVSSLYQFHNTHFLPQLLESIRDWHTT--KRIANVVRKQAPFLKMYSEYTNNYDRAT 398
Query: 191 KPDSNAAVVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQACCAEGQG 367
K + D + ++++ + E PL +LI PVQR+ +YQLLL++ +
Sbjct: 399 KLFEELKKKKKFADVVKEIEKQAECEGLPLGHHLICPVQRVMRYQLLLQEYKKHLQPSDV 458
Query: 368 EIKD---GLEVMLSVPKKANDAM 427
+ D LE++L AN+ M
Sbjct: 459 DFDDTTVALELVLQAAAHANEMM 481
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 36.3 bits (80), Expect = 0.018
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Frame = +2
Query: 35 DLIFGNIEEIHRFHERVFL---RELDKY--ETMPEDVGHCFVTWAREFDMYVSYCRNKPD 199
D IF I EI H+ + + +D++ + + DV + + Y+S+ N
Sbjct: 402 DKIFYRIPEILAHHQVLLTTLSQRIDQWHKDAILGDVLLAHFSKQSMIETYISFVDNFKF 461
Query: 200 SNAAVVQHAGDY-FERVQRKKKLEHP----LAAYLIKPVQRITKYQLLLKDL 340
+ A+++Q + FE+ + +HP L + LI P+QR+ +Y+L++K +
Sbjct: 462 AKASIIQARQKHAFEKYYNRCCRDHPNKLDLDSLLISPIQRVPRYELIVKQM 513
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 35.1 bits (77), Expect = 0.041
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLR-ELDKYETMPE-DVGHCFVTWAREF-DMYVSYCRNKPDSNAA 211
+ GN E I+ +F + E ++ E +P+ VG F+ A E +SY N PD+
Sbjct: 315 LVGNFEVIYTLKRDLFEQLEREQNEELPKMRVGGMFMNAALELRTALMSYADNHPDA-VE 373
Query: 212 VVQHAGDYFERVQRKKKLEH-PLAAYLIKPVQRITKYQLLLKDLQ 343
V++ E+V + + E+ L L +P++ + +Y LL++L+
Sbjct: 374 VLKKKQKELEKVVKSQDREYKELVLGLSEPLRHVERYYNLLQELE 418
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Frame = +2
Query: 41 IFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREFDMYVSYCRNKPDSNA--AV 214
+FG I I + H+ + L+ + P + F + +Y SY + P+S A
Sbjct: 98 MFGEISAICKTHQIL----LESLQCKP--IAEVFTKFVPFLKLYTSYASHYPNSLKIFAK 151
Query: 215 VQHAGDY---FERVQRKKKLE-HPLAAYLIKPVQRITKYQLLLKDL 340
+ D+ +++ +++ L YLI P+QRI +Y +L+++L
Sbjct: 152 LMSRNDFRKALTKIEEDPRVDGKKLQTYLIMPIQRIPRYIMLIQNL 197
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +2
Query: 155 REFDMYVSYCRNKPDSNAAV----VQHAG--DYFERVQRKKKLEH-PLAAYLIKPVQRIT 313
+ F++Y+ YC N+ + + ++ G +R++ K+ + + ++L+ P+QR+T
Sbjct: 261 KHFEVYIKYCSNQVYQDRTLRRLKTENPGFLSAVQRLEENKQCQGLDMRSFLMLPMQRVT 320
Query: 314 KYQLLL 331
+Y LLL
Sbjct: 321 RYPLLL 326
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Frame = +2
Query: 155 REFDMYVSYCRNKPDSNAAV----VQHAG--DYFERVQRKKKLEH-PLAAYLIKPVQRIT 313
+ F++Y+ YC N+ + + ++ G +R++ K+ + + ++L+ P+QR+T
Sbjct: 749 KHFEVYIKYCSNQVYQDRTLRRLKTENPGFLSAVQRLEENKQCQGLDMRSFLMLPMQRVT 808
Query: 314 KYQLLL 331
+Y LLL
Sbjct: 809 RYPLLL 814
>AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical
protein C11D9.1 protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 287 LIKPVQRITKYQLLLKDL 340
+IKPVQRI +Y LLLK++
Sbjct: 349 MIKPVQRIVQYPLLLKNI 366
>U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical
protein F47C10.8 protein.
Length = 402
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 201 AMRLS-SNTPAITLRGCNERKNSSIHSPLI*SNRFKGLPSINCC*RIFRHAVLKDKER*R 377
AM LS SN P T+ G +++S H+ G+ S N C FR V++
Sbjct: 58 AMELSTSNAPKCTICG----RDASCHN--------YGVLSCNACKMFFRRVVIEQLTYHC 105
Query: 378 TAWKLCSQCQRRPMMRC 428
W +C + +P+++C
Sbjct: 106 KKWNMCLENSGQPILQC 122
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 197 LACCDSTTRTYRTRAPKSRSSGRRLPASSRICPIL*GKRARGNDES 60
L C D T R+R+P+ RS R P SR P +R+ G+D S
Sbjct: 179 LKCTDETRDRSRSRSPRRRSRSRS-PTRSRSPPA--RRRSPGSDRS 221
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical
protein F18C12.2b protein.
Length = 2271
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 289 QISGEWMLEFFLSLHPLKVIAGVLDDSRIAVWLVATVRHVHIELARPSHEAVADVFRHRL 110
+I+ +W+ E FLS+ PL+ G +DS+ + + R S + D+ H L
Sbjct: 45 EITNQWLYEDFLSVKPLR--NGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDILTHCL 102
Query: 109 VF-VQFSEENALVETMNLF 56
F +F+++N T+ F
Sbjct: 103 QFSTKFADKNFEPLTVTAF 121
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical
protein F18C12.2a protein.
Length = 2279
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 289 QISGEWMLEFFLSLHPLKVIAGVLDDSRIAVWLVATVRHVHIELARPSHEAVADVFRHRL 110
+I+ +W+ E FLS+ PL+ G +DS+ + + R S + D+ H L
Sbjct: 45 EITNQWLYEDFLSVKPLR--NGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDILTHCL 102
Query: 109 VF-VQFSEENALVETMNLF 56
F +F+++N T+ F
Sbjct: 103 QFSTKFADKNFEPLTVTAF 121
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -1
Query: 289 QISGEWMLEFFLSLHPLKVIAGVLDDSRIAVWLVATVRHVHIELARPSHEAVADVFRHRL 110
+I+ +W+ E FLS+ PL+ G +DS+ + + R S + D+ H L
Sbjct: 45 EITNQWLYEDFLSVKPLR--NGGSNDSKQDEYKIHVRNRGKNNDMRFSSDYTTDILTHCL 102
Query: 109 VF-VQFSEENALVETMNLF 56
F +F+++N T+ F
Sbjct: 103 QFSTKFADKNFEPLTVTAF 121
>AF106583-5|AAD03136.1| 301|Caenorhabditis elegans Hypothetical
protein F23C8.8 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 13/62 (20%)
Frame = +2
Query: 230 DYFER-------VQRKKKLEHPLAA----YLIKPVQRITKYQLLLKD--LQACCAEGQGE 370
DY+ER +Q+K+ EHPLAA LI+ + + K ++ +D L+ +G G+
Sbjct: 103 DYYERGTLLEWILQKKRLKEHPLAATLFRQLIEAINYLHKRGIVHRDVKLENILIDGNGD 162
Query: 371 IK 376
IK
Sbjct: 163 IK 164
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 227 GDYFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLEVMLSVP 406
G+Y E+ + + EH A L+K V + + +DL+ + + D E + V
Sbjct: 1845 GEYVEKRLNRAQQEHKKAEELLKMVTAQKLNETIFEDLKNRIDVLEQWMNDYRETIYDVS 1904
Query: 407 KK-ANDAMHLSLLEG 448
KK DA +SL+ G
Sbjct: 1905 KKDTADAERMSLVVG 1919
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 171 YISNSRAQVTKQWPTSSGIVSYLSNSLRKTRSWKR*ISSMLPNIKSSFP*SGSGTEA 1
Y + + + P +G++ LSNS+RK + +S L N + SGSG ++
Sbjct: 205 YKGGANVPLPAEQPGENGLIGLLSNSIRKVIK-ETGVSDALSNSLPNLLGSGSGADS 260
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 481 DLAEAVSRDVTPLEQRE--VHRIIGLLWH*E 395
DL E +SRDV+ L+QRE R GL+ H E
Sbjct: 1919 DLNETLSRDVSLLKQRETTARRTPGLIGHRE 1949
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 481 DLAEAVSRDVTPLEQRE--VHRIIGLLWH*E 395
DL E +SRDV+ L+QRE R GL+ H E
Sbjct: 1919 DLNETLSRDVSLLKQRETTARRTPGLIGHRE 1949
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical protein
F20C5.2b protein.
Length = 1130
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = -3
Query: 290 SNKRRVDARVFSFVAPSQSNRRRVGRQPHCCLACCDSTTRTYRTRAPKSRSSGRRLPASS 111
S+ RR++ + + + +R P C LA S R + + S S +RL SS
Sbjct: 915 SSNRRIETEMLLSRSQEKRKQRASSYDPRCLLALHSSPFRLSTSASATSSSQHQRLLTSS 974
Query: 110 RI 105
I
Sbjct: 975 SI 976
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 171 YISNSRAQVTKQWPTSSGIVSYLSNSLRKTRSWKR*ISSMLPNIKSSFP*SGSGTEA 1
Y + + + P +G++ LSNS+RK + +S L N + SGSG ++
Sbjct: 205 YKGGANVPLPAEQPGENGLIGLLSNSIRKVIK-ETGVSDALSNSLPNLLGSGSGADS 260
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 481 DLAEAVSRDVTPLEQRE--VHRIIGLLWH*E 395
DL E +SRDV+ L+QRE R GL+ H E
Sbjct: 1919 DLNETLSRDVSLLKQRETTARRTPGLIGHRE 1949
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 227 GDYFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLEVMLSVP 406
G+Y E+ + + EH A L+K V + + +DL+ + + D E + V
Sbjct: 1845 GEYVEKRLNRAQQEHKKAEELLKMVTAQKLNETIFEDLKNRIDVLEQWMNDYRETIYDVS 1904
Query: 407 KK-ANDAMHLSLLEG 448
KK DA +SL+ G
Sbjct: 1905 KKDTADAERMSLVVG 1919
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 227 GDYFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLEVMLSVP 406
G+Y E+ + + EH A L+K V + + +DL+ + + D E + V
Sbjct: 1845 GEYVEKRLNRAQQEHKKAEELLKMVTAQKLNETIFEDLKNRIDVLEQWMNDYRETIYDVS 1904
Query: 407 KK-ANDAMHLSLLEG 448
KK DA +SL+ G
Sbjct: 1905 KKDTADAERMSLVVG 1919
>AF063007-7|AAC16428.1| 659|Caenorhabditis elegans Hypothetical
protein R119.5 protein.
Length = 659
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 248 APSQSNRRRVGR--QPHCCLACCDSTTRTYRTRAPKSRSSGRRLPASS 111
+PS S +V +P C +T+R R R+PKS S+ + +SS
Sbjct: 547 SPSTSTESQVSEDEEPCCSTDPASTTSRRRRIRSPKSESAKKPRKSSS 594
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,267,177
Number of Sequences: 27780
Number of extensions: 324623
Number of successful extensions: 1188
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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