Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2249
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.4  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   7.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.8  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = -1

Query: 136 VADVFRHRLVFVQFSEENALVETMNLFY----VTKYQVLLSLKWQ 14
           V+DVFR+ L+   F ++++     + FY     +KY+ L  LK+Q
Sbjct: 327 VSDVFRYGLLIYDFFKDSSFRIQHHFFYPDPLASKYE-LHGLKFQ 370


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 576 FGERSEGFPPEKPKF 620
           F +RS GFP +KP +
Sbjct: 642 FDKRSFGFPLDKPLY 656


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 576 FGERSEGFPPEKPKF 620
           F +RS GFP +KP +
Sbjct: 642 FDKRSFGFPLDKPLY 656


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 472 EAVSRDVTPLEQR 434
           EAVS D+ PLE R
Sbjct: 31  EAVSNDMQPLEAR 43


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +2

Query: 245 VQRKKKLEHPLAAYLIKPVQRITKYQLLLKDLQACCAEGQ 364
           V+R   + HP  ++ +  + R  K+ +++  L  C A  Q
Sbjct: 150 VERYIAICHPFISHTMSKLSRAVKFIIVIWLLALCLAVPQ 189


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 338 LQACCAEGQGEIKDGLEVMLSVPKKANDAMH 430
           LQA   + QG + DG +    V  + +  MH
Sbjct: 143 LQAAAVDHQGSVLDGPDSPPLVESQMHHQMH 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,981
Number of Sequences: 438
Number of extensions: 4001
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)