Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2248
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.29 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.66 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.66 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.66 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   2.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.2  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = -3

Query: 231 HCIFLIIFGLF*YYYN---FTVIVLVHISTFKSYSNHQYI--FFVTIESWLY*KKCMHIK 67
           +C+ +I+  ++ +YY    FTV +L+ +  +  Y  H      F+     L    C++  
Sbjct: 229 YCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY- 287

Query: 66  KWKLHCTFLIIFGLFYYSYYF 4
               +C  +I+  ++Y+   F
Sbjct: 288 ---FYCALIILLCIYYFCRAF 305



 Score = 21.4 bits (43), Expect = 4.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 236 FHFLCAYIFF 265
           +HF CA+I F
Sbjct: 167 YHFFCAFIIF 176


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 69  LYAYIFFSITTTLL 110
           LYAY+F+ +TT L+
Sbjct: 89  LYAYVFYVVTTVLV 102


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 69  LYAYIFFSITTTLL 110
           LYAY+F+ +TT L+
Sbjct: 89  LYAYVFYVVTTVLV 102


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 69  LYAYIFFSITTTLL 110
           LYAY+F+ +TT L+
Sbjct: 89  LYAYVFYVVTTVLV 102


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 349 HSNSSGSYLKVIQIIN*FFCYHRVAFILKKN 257
           HS  +  YLKV+     F C   +   ++KN
Sbjct: 15  HSMKNFKYLKVLVTFAHFICLFPITINIRKN 45


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 139 FKSSIHFLCHNRVVVILKKMYA-YKKMETPL 50
           F++ + F C   +VVILK + A Y++ +  L
Sbjct: 46  FENYVTFFCSLFIVVILKLILAKYRQQDVTL 76


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 256 VCT*KMETPLHFSYYFWPILILLQFHS 176
           VC+ K    +   ++ WPI++++ + S
Sbjct: 198 VCSIKELNMIFNEFFGWPIIMIILYSS 224


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 145 KLFKSSIHFLCHNR 104
           ++ K  IHFL HN+
Sbjct: 79  EMTKKVIHFLSHNK 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,064
Number of Sequences: 336
Number of extensions: 2531
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)