Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2248
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.58 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   1.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 486 NRFGTGQDLYSYRVALLLKKKKNYIHKW 403
           ++F TGQ   +YR A L ++ KN +  W
Sbjct: 185 HQFATGQPDLNYRSAALDQEMKNVLTFW 212


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 414 YNFFFFLVIALLCSY 458
           Y+FFF LVI L+  Y
Sbjct: 5   YHFFFILVITLIFLY 19


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 435 LKKKKNYIHKWK 400
           L+K  N IH+WK
Sbjct: 28  LEKSLNVIHEWK 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,036
Number of Sequences: 438
Number of extensions: 2362
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)