Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2237
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 32 0.33
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z48621-8|CAA88548.2| 180|Caenorhabditis elegans Hypothetical pr... 28 4.1
AB038499-1|BAB11964.1| 180|Caenorhabditis elegans galectin LEC-... 28 4.1
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 28 5.4
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 28 5.4
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 28 5.4
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 27 7.1
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 27 7.1
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 27 7.1
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 27 7.1
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +3
Query: 165 YSWEQNKSWRFSHSYFMPDPLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPL 344
YS ++ WR + S F G F WG +G+ S I G R P
Sbjct: 221 YSRTNDRMWRKTRSRFTNSRCAGADANRNYPFYWGTQGVSHSQCSEIFC-GSR-----PQ 274
Query: 345 SSHTEFSVSTRILRDETKVKG 407
S +++ I+RDE ++KG
Sbjct: 275 SEPEVLALTNAIIRDEERIKG 295
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +3
Query: 165 YSWEQNKSWRFSHSYFMPDPLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPL 344
YS ++ WR + S F G F WG +G+ S I G R P
Sbjct: 221 YSRTNDRMWRKTRSRFTNSRCAGADANRNYPFYWGTQGVSHSQCSEIFC-GSR-----PQ 274
Query: 345 SSHTEFSVSTRILRDETKVKG 407
S +++ I+RDE ++KG
Sbjct: 275 SEPEVLALTNAIIRDEERIKG 295
>Z83120-5|CAB05588.1| 1467|Caenorhabditis elegans Hypothetical
protein R06A4.8 protein.
Length = 1467
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +3
Query: 33 RKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDELGYGLIAYSW 173
+K ++ PE+ ++T + ++ D+G E+ FAY ++ + + W
Sbjct: 406 KKGLVSPENPLTTDYFLHLEADLGWKSEEKFAYDPEKSKFLMAFNGW 452
>Z48621-8|CAA88548.2| 180|Caenorhabditis elegans Hypothetical
protein R07B1.10 protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 201 HSYFMPDPLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRI 380
H F + L G + +NF++ + I + GA G + +PL H F++S +
Sbjct: 36 HKDFSVELLSGPHIVLHVNFRFEHDHIVAMNTCTNGAWGAEIRHHNPLKHHDHFNLSIHV 95
>AB038499-1|BAB11964.1| 180|Caenorhabditis elegans galectin LEC-8
protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 201 HSYFMPDPLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRI 380
H F + L G + +NF++ + I + GA G + +PL H F++S +
Sbjct: 36 HKDFSVELLSGPHIVLHVNFRFEHDHIVAMNTCTNGAWGAEIRHHNPLKHHDHFNLSIHV 95
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 222 PLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRILRDETKV 401
P++ + + W A G A PI GY Y+SP T F++ + E ++
Sbjct: 537 PIIVNVTDTEVELHWNAPSTSG--AGPI--TGYIIQYYSPDLGQTWFNIPDYVASTEYRI 592
Query: 402 KG 407
KG
Sbjct: 593 KG 594
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 222 PLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRILRDETKV 401
P++ + + W A G A PI GY Y+SP T F++ + E ++
Sbjct: 537 PIIVNVTDTEVELHWNAPSTSG--AGPI--TGYIIQYYSPDLGQTWFNIPDYVASTEYRI 592
Query: 402 KG 407
KG
Sbjct: 593 KG 594
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 222 PLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRILRDETKV 401
P++ + + W A G A PI GY Y+SP T F++ + E ++
Sbjct: 537 PIIVNVTDTEVELHWNAPSTSG--AGPI--TGYIIQYYSPDLGQTWFNIPDYVASTEYRI 592
Query: 402 KG 407
KG
Sbjct: 593 KG 594
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 24 QIIRKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDE 143
QII D T I+ LD+ T ED AY +DE
Sbjct: 167 QIISNLNATARDTEPTATISKPNLDLDTEMEDMLAYLNDE 206
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 24 QIIRKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDE 143
QII D T I+ LD+ T ED AY +DE
Sbjct: 167 QIISNLNATARDTEPTATISKPNLDLDTEMEDMLAYLNDE 206
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 24 QIIRKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDE 143
QII D T I+ LD+ T ED AY +DE
Sbjct: 167 QIISNLNATARDTEPTATISKPNLDLDTEMEDMLAYLNDE 206
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 24 QIIRKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDE 143
QII D T I+ LD+ T ED AY +DE
Sbjct: 167 QIISNLNATARDTEPTATISKPNLDLDTEMEDMLAYLNDE 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,132,079
Number of Sequences: 27780
Number of extensions: 274092
Number of successful extensions: 715
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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