Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2236
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030530-1|AAH30530.1|  617|Homo sapiens synovial apoptosis inhi...    31   3.4  
AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.                 31   3.4  
AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.                 31   3.4  
AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.     31   3.4  
AB024690-1|BAC57449.1|  617|Homo sapiens Synoviolin1 protein.          31   3.4  

>BC030530-1|AAH30530.1|  617|Homo sapiens synovial apoptosis
           inhibitor 1, synoviolin protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +2

Query: 467 EGGPRKEAPGFCFPGPWKRMPRP 535
           E GP   APGF FP PW  MP P
Sbjct: 447 EAGP---APGFPFPPPWMGMPLP 466


>AF317634-1|AAL26903.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +2

Query: 467 EGGPRKEAPGFCFPGPWKRMPRP 535
           E GP   APGF FP PW  MP P
Sbjct: 446 EAGP---APGFPFPPPWMGMPLP 465


>AB085847-1|BAC24801.1|  616|Homo sapiens HRD1 protein.
          Length = 616

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +2

Query: 467 EGGPRKEAPGFCFPGPWKRMPRP 535
           E GP   APGF FP PW  MP P
Sbjct: 446 EAGP---APGFPFPPPWMGMPLP 465


>AB058713-1|BAB47439.1|  579|Homo sapiens KIAA1810 protein protein.
          Length = 579

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +2

Query: 467 EGGPRKEAPGFCFPGPWKRMPRP 535
           E GP   APGF FP PW  MP P
Sbjct: 409 EAGP---APGFPFPPPWMGMPLP 428


>AB024690-1|BAC57449.1|  617|Homo sapiens Synoviolin1 protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/23 (60%), Positives = 14/23 (60%)
 Frame = +2

Query: 467 EGGPRKEAPGFCFPGPWKRMPRP 535
           E GP   APGF FP PW  MP P
Sbjct: 447 EAGP---APGFPFPPPWMGMPLP 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,349,093
Number of Sequences: 237096
Number of extensions: 1037791
Number of successful extensions: 3110
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3102
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)