Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2232
(640 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein. 33 0.010
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 31 0.023
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 27 0.50
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 26 0.88
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 25 1.5
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 3.5
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 3.5
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 24 4.7
AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 23 6.2
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 23 8.2
>AY428512-1|AAR89530.1| 420|Anopheles gambiae EKN1 protein.
Length = 420
Score = 32.7 bits (71), Expect = 0.010
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = -1
Query: 391 LKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAK 212
LK + + ++ ++ SK A +K+RK +I R + D+L++ + E +
Sbjct: 110 LKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKR 169
Query: 211 TRKEIKKEYDPDDPTGISPSSG 146
+ K+Y PD +PS+G
Sbjct: 170 MELAMVKQYRPDPAKASAPSAG 191
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 31.5 bits (68), Expect = 0.023
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = -1
Query: 391 LKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAK 212
LK + + ++ ++ SK A +K+RK +I R + D+L++ + E +
Sbjct: 110 LKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADRSAIDNLLEESKQRELKR 169
Query: 211 TRKEIKKEYDPDDPTGISPSSG 146
+ K+Y PD +P++G
Sbjct: 170 MELAMVKQYRPDPAKASAPNAG 191
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 27.1 bits (57), Expect = 0.50
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 213 LAFSAACILLIRSSDIFGSTLLPFSDGIISNIDLRFFLPAIALEVFLCD 359
+A + C LLI FG+ ++ G+IS + RF PAI + + D
Sbjct: 289 VAVGSICNLLIHP---FGALIVGVMAGVISVLGYRFLTPAILSNLRIAD 334
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 26.2 bits (55), Expect = 0.88
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 373 RRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRV-EPKISDDLIKRIQAAEKAKTRKEI 197
R + T H T+ + G+ +FD +PS + + E I+D+L+ I K K R+ +
Sbjct: 2929 RNDVTQHAITTGKVVGRPESTLIFDKLPSAASKVIDEIIITDNLVLTIL---KKKHRRSV 2985
Query: 196 K 194
K
Sbjct: 2986 K 2986
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 25.4 bits (53), Expect = 1.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 237 LLIRSSDIFGSTLLPFSDGIISNID-LRFFLPAIALEVFLCDVEFLLSLFIF 389
++IR +F + L +IS + L F+LPA A E + LLSL +F
Sbjct: 226 IIIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVF 277
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 3.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 150 LDGLMPVGSSGSYSFLISFL 209
+ G PVG +GS++FL ++
Sbjct: 2733 IGGFAPVGIAGSFTFLTGYI 2752
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.2 bits (50), Expect = 3.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 343 SKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAKTRKEIKK 191
+K+ K R+ + N R ++ DDL +R+ AAEK ++ K
Sbjct: 1521 AKSQVDKAMREVSLIMSELANLREIDVNSLDDLERRLSAAEKELEDAQLTK 1571
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.8 bits (49), Expect = 4.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 144 SPLDGLMPVGSSGSYSFLISFLVLAFSAACILLIRSSDIFGSTLLPFSD 290
SP D ++ + SSGS S L +A ++A + + D F L+ FSD
Sbjct: 266 SPKDVIILLDSSGSMSGKEYQLAVATASAILDTLGDDDFF--NLISFSD 312
>AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein.
Length = 94
Score = 23.4 bits (48), Expect = 6.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 253 QISSAQLFYHSRTG*YQTLTC 315
Q++SA L SR+ QTLTC
Sbjct: 45 QMASAPLVAQSRSAMVQTLTC 65
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 548 ECRWGCSPKRRKMNSSSRETQK 483
+CR C RRKMN + Q+
Sbjct: 280 QCRSHCIEARRKMNRAKSSEQR 301
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,208
Number of Sequences: 2352
Number of extensions: 11535
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -