Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2232
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 34 0.075
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 34 0.099
AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical ... 31 0.53
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 29 2.1
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 29 2.8
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical... 28 4.9
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 4.9
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF016681-15|AAB66168.1| 172|Caenorhabditis elegans Hypothetical... 27 8.6
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = -1
Query: 409 DQN*TKLKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQ 230
D K K K D++ + ++ K KK +K D +N ++ + K DD +
Sbjct: 253 DDEEEKDKKKKDKKKNDDDEEDKKK--DKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDE 310
Query: 229 AAEKAKTRKEIKKEYDPDD 173
EK K +K+ KK+ D DD
Sbjct: 311 EKEKDKKKKDKKKDDDDDD 329
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = -2
Query: 567 NFTYLLGMSMGMLP*EKKDELLKQRDPEICLS*PPLKNKPAPMLWREDLDAFLIKI 400
++ YL+GM++ L E+K++L+K+ + ++ ++ K LW EDLD F+ ++
Sbjct: 1172 DYDYLVGMALIKLSEEEKNKLIKESEEKMA-EVRVIEKKTWQDLWHEDLDNFVSEL 1226
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -1
Query: 364 STSHKKTSKAMAGKKNRKSMF-DIIPSENGRRVEPKISDDLIKRIQAAEKAKTRKEIKKE 188
+ + K + A G+ +K++ +++PS++G+R+EP + + + + K + K+
Sbjct: 1243 NAAKKLAADAKTGRGPKKNVCTEVLPSKDGQRIEPMLDAATKAKYEKMSQPKKERVKKEP 1302
Query: 187 YDPDDP 170
+P +P
Sbjct: 1303 KEPKEP 1308
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 33.9 bits (74), Expect = 0.099
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = -2
Query: 567 NFTYLLGMSMGMLP*EKKDELLKQRDPEICLS*PPLKNKPAPMLWREDLDAFLIKI 400
++ YL+GM++ L E+K++L+K+ + ++ ++ K LW EDLD F+ ++
Sbjct: 1172 DYDYLVGMALIKLSEEEKNKLIKESEEKMA-EVRVIEKKTWQDLWHEDLDNFVSEL 1226
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -1
Query: 364 STSHKKTSKAMAGKKNRKSMF-DIIPSENGRRVEPKISDDLIKRIQAAEKAKTRKEIKKE 188
+ + K + A G+ +K++ +++PS++G+R+EP + + + + K + K+
Sbjct: 1243 NAAKKLAADAKTGRGPKKNVCTEVLPSKDGQRIEPMLDAATKAKYEKMSQPKKERVKKEP 1302
Query: 187 YDPDDP 170
+P +P
Sbjct: 1303 KEPKEP 1308
>AC006776-1|AAF60626.2| 616|Caenorhabditis elegans Hypothetical
protein Y46H3C.4 protein.
Length = 616
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/72 (25%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Frame = -1
Query: 352 KKTSKAMAGKKNRKSMF-DIIPSENGRRVEPKI---SDDLIKRIQAAEKAKTRKEIKK-- 191
K + A +G+ + K++ +++PS++G R+EP+ + +++ ++ + +KE KK
Sbjct: 479 KLAADAKSGRGSTKNVCPEVLPSKDGHRIEPRFDAATKAKYEKMTQPKRERVKKEPKKLA 538
Query: 190 -EYDPDDPTGIS 158
+ D DD G++
Sbjct: 539 WQADCDDDVGVT 550
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -2
Query: 564 FTYLLGMSMGMLP*EKKDELLKQRDPEICLS*PPLKNKPAPMLWREDLDAFLIKI 400
+ YL GM++ + E+ ++L+ + + ++ LK K LW EDLD FL ++
Sbjct: 405 YEYLFGMTILDVSEEETNKLINESEEKMT-ELRVLKKKTWQDLWHEDLDNFLSEL 458
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = -1
Query: 412 SDQN*TKLKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRI 233
SD K ++ D +S H+ TSK KN +F S++ PK ++DL + +
Sbjct: 116 SDAEGKKRRVMLDSDDS-DHEGTSKKEPTTKN---LFGD-DSDDDDEDRPKKTNDLDEFV 170
Query: 232 QAAEKAKTRKEIKKEYDPDDPTG 164
+ ++ ++++ K YD DD G
Sbjct: 171 EGRDEEESQETSKPAYDSDDDDG 193
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Frame = -1
Query: 448 GTNAVAGRSRRVSDQN*TKLKIK------SDRRNSTSHKKTSKAMAGKKNRKSMFDIIPS 287
GTNA + SR + + K K+K + ST+ K++SK ++ KS
Sbjct: 106 GTNATSFNSRNGTGEEKKKKKVKKEDKKGDEEEKSTTKKRSSKKETHEEKEKSEKKKSAE 165
Query: 286 ENGRRVEPKISDDLIKRI-QAAEKA--KTRKEIKKEYDPDD 173
E ++ + S + K +++EK+ K+ KE KKE D
Sbjct: 166 EKEKKKKSSSSKERHKSSDRSSEKSSEKSSKEKKKEKSTTD 206
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 391 LKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSE 284
LK+K RN S K ++ GK N K +IPSE
Sbjct: 123 LKLKEVVRNGNSKIKLMFSIGGKDNSKYFSSVIPSE 158
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 391 LKIKSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSE 284
LK+K RN S K ++ GK N K +IPSE
Sbjct: 123 LKLKEVVRNGNSKIKLMFSIGGKDNSKYFSSVIPSE 158
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = -1
Query: 361 TSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAK 212
++H+K + GKK ++ + + ++N + KI++ L KR+QA+E A+
Sbjct: 862 STHQKLEQV--GKKLKQLLSEYEENQNALDEQRKITEALEKRLQASESAR 909
>AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical
protein Y116A8C.37 protein.
Length = 298
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -1
Query: 325 KKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAKTRKEIKKEYDPDDPTGISPS 152
++NR++ E G+ V+ K D + R+ EK + RKE KKE D + +G P+
Sbjct: 13 RRNRQARKVKKVEELGKVVDRKEMDSPLGRLYE-EKKEERKEEKKEVDKEPWSGEEPA 69
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 382 KSDRRNSTSHKKTSKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAKTRK 203
KS ++ + K SK +N KS E + EPK ++ ++ + +EK +K
Sbjct: 30 KSSTASAAAPKADSKMKPPVENVKSKKSEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKK 89
Query: 202 -EIKKEYDPDD 173
E KKE D D
Sbjct: 90 EEAKKEDDKKD 100
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = -1
Query: 547 NVDGDAPLREER*TPQAERPRNLPELTTIEK*TGTNAVAGRSRRVSDQN*TKLKIKSDRR 368
NV G + ER P + K +N V G+S R++ + +S
Sbjct: 147 NVYGGIGGKSERMAPTENASGGGNSVILGPKDNTSNGVGGKSERLAVDSGPASSDQSSSA 206
Query: 367 NSTSHKKTSKAMAGKKNRKS 308
+++ K SK + KKN+KS
Sbjct: 207 PASTESKKSKKIKKKKNKKS 226
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -1
Query: 382 KSDRRNSTSHKKT-SKAMAGKKNRKSMFDIIPSENGRRVEPKISDDLIKRIQAAEKAKTR 206
K R + H++ ++A A +K ++ + + EN RVE + + + + QA +AK
Sbjct: 307 KERREHIERHRQAEARAKALEKEKRELEEKQKKENLERVEKERREHIERHRQAEARAKAL 366
Query: 205 KEIKKEYD 182
++ K+E +
Sbjct: 367 EKEKRELE 374
>Z81041-6|CAB02788.1| 336|Caenorhabditis elegans Hypothetical
protein C27A7.7 protein.
Length = 336
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 180 GSYSFLI---SFLVLAFSAACILLIRSSDIFGSTLLPF-SDGIISN-IDLRFFLPAIALE 344
G+Y +++ + +S +L+ S G+T F + G SN +DL FF P +
Sbjct: 39 GAYKYMLVCFGLFDITYSTVDMLVAMGSHSEGNTFCVFVTHGPFSNYLDLGFFAPCVRCM 98
Query: 345 VFLCDVEFLLSLFIFNFV 398
F L FI+ +V
Sbjct: 99 FFSLSYGVLELHFIYRYV 116
>AF016681-15|AAB66168.1| 172|Caenorhabditis elegans Hypothetical
protein F22E5.2 protein.
Length = 172
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 189 SFLISFLVLAFSAACILLIRSSDIFGSTLLPFSD 290
S ++ F + S AC+ + D++ S+ PF D
Sbjct: 2 SLILFFYFMVLSEACMRTVAPEDVYISSTFPFED 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,198,545
Number of Sequences: 27780
Number of extensions: 238147
Number of successful extensions: 836
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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