Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2231
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0053 + 11721658-11721689,11721960-11722710                       28   6.9  
03_01_0626 + 4596022-4596462,4596549-4596667,4596745-4596801,459...    28   6.9  

>08_02_0053 + 11721658-11721689,11721960-11722710
          Length = 260

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 514 YNVLGSYFTTKVSFRIGFNTLHYSKNGSKGFFI 612
           + V+G + T+ +++ +  ++LH+  N    FF+
Sbjct: 5   FEVIGEWATSSMAYPVSLSSLHHHPNNHHAFFL 37


>03_01_0626 +
           4596022-4596462,4596549-4596667,4596745-4596801,
           4596921-4597159,4597261-4597379,4597488-4597574,
           4597673-4597720
          Length = 369

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 464 KNFAK*ICNTLNVFRGFIMSWVLTSLLRFRFGLASIPCTI 583
           KNFA    + + +     +SW+L S  RFRFGL  I  T+
Sbjct: 72  KNFASAAASGVALCVHVAISWLLVS--RFRFGLVGIALTL 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,727,551
Number of Sequences: 37544
Number of extensions: 204652
Number of successful extensions: 328
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)