Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2228
(463 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 38 7e-04
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 37 0.001
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.003
SPCC18.15 |||WD repeat protein, human WRDR85 family|Schizosaccha... 36 0.004
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 36 0.004
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 34 0.012
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.016
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 33 0.016
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 33 0.028
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 33 0.028
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 33 0.028
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 32 0.037
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 32 0.037
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 31 0.065
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.086
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.086
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 31 0.11
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 31 0.11
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 30 0.15
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 30 0.15
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 30 0.20
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 30 0.20
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 0.26
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.26
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 29 0.35
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 29 0.35
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.35
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 29 0.46
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 0.60
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 28 0.60
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 28 0.80
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 27 1.1
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 27 1.1
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 1.1
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 1.1
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 1.4
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 27 1.4
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 1.4
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 27 1.4
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 27 1.4
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 27 1.4
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 1.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 1.8
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 27 1.8
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 1.8
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 1.8
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 1.8
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 26 2.4
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 26 2.4
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 26 2.4
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 26 2.4
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 26 2.4
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 2.4
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 26 3.2
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 26 3.2
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 3.2
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 25 5.6
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 7.4
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 7.4
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 25 7.4
SPAC144.15c |cog1||Golgi transport complex subunit Cog1 |Schizos... 24 9.8
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 24 9.8
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 24 9.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 24 9.8
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 37.9 bits (84), Expect = 7e-04
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 277 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSC-VFGSTKMKRKEIPAAPM 453
L GH E + + F P NL + G D L KLWD+RA C F I P
Sbjct: 143 LKGH-EMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFPS 201
Query: 454 NA 459
NA
Sbjct: 202 NA 203
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 37.1 bits (82), Expect = 0.001
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = +1
Query: 118 KKYKIVTEHAVSLLHSYIHRLD----GTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHG 285
K + V EH + + HSY L +AI D+ + IY L V R G
Sbjct: 347 KLFDFVKEHVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKL--VARCQG 404
Query: 286 HKEATLTQVVFSP---KEDNL-LYSTGLDGLVKLWD 381
HK + +T V+F +DN + S GLD + LWD
Sbjct: 405 HK-SWVTDVIFDAWRCDDDNYRIASVGLDRKLLLWD 439
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.9 bits (79), Expect = 0.003
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
+A D I I+ S + + Q LHGH+E+ + V FSP + L S LD +KLW+
Sbjct: 432 IAAGSLDKVIRIWTSSGTLVEQ---LHGHEESVYS-VAFSP-DGKYLVSGSLDNTIKLWE 486
Query: 382 IR 387
++
Sbjct: 487 LQ 488
>SPCC18.15 |||WD repeat protein, human WRDR85
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 35.5 bits (78), Expect = 0.004
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
LA+S+S+ S+ I + + + H ++ T +S +++NLLYS G D + +D
Sbjct: 114 LAVSMSNGSVLIIDIDSGVIKNKWKEHDYEAWTCH---YSRQDNNLLYSGGDDAALVCYD 170
Query: 382 IRAGGSCVF 408
R SC++
Sbjct: 171 QRIPNSCIW 179
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 35.5 bits (78), Expect = 0.004
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
LA +D +I ++ L + + ++ L GH++ +T++ FSP E+ +L ST D +WD
Sbjct: 297 LATCSTDKTIALWDLRNLN-QRLHTLEGHEDI-VTKISFSPHEEPILASTSADRRTLVWD 354
Query: 382 I 384
+
Sbjct: 355 L 355
Score = 30.7 bits (66), Expect = 0.11
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 190 KSLNLAISLS-DNSIEIYKLS--DSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLD 360
K +L S+S D + ++ + D+S +H H + V F+P D +L + D
Sbjct: 245 KHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHS-GPIHSVAFNPHNDFILATCSTD 303
Query: 361 GLVKLWDIR 387
+ LWD+R
Sbjct: 304 KTIALWDLR 312
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 33.9 bits (74), Expect = 0.012
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 283 GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRA 390
GHK+ T+T + SP ++ L S LD ++LWD+R+
Sbjct: 110 GHKQ-TVTSIDVSPADETFL-SASLDNTIRLWDLRS 143
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.5 bits (73), Expect = 0.016
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 193 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVK 372
S LA D +I I+ + Q L GH A L + S + + S DGLVK
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQT--LEGHTGAILKLIYIS--QGTQVVSAAADGLVK 574
Query: 373 LWDIRAGGSCV 405
+W + + G CV
Sbjct: 575 VWSL-SSGECV 584
Score = 27.9 bits (59), Expect = 0.80
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 193 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVK 372
S L + + IY++ ++ + H+ +T + + LL + G +GLVK
Sbjct: 73 SKKLIAAFRSRLLTIYEIPSG--RRIKSMKAHETPVITMTI--DPTNTLLATGGAEGLVK 128
Query: 373 LWDI 384
+WDI
Sbjct: 129 VWDI 132
Score = 24.6 bits (51), Expect = 7.4
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +1
Query: 220 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 393
D +++++ + S + + H + V P E+ +LY+ G L+ WD ++G
Sbjct: 210 DKTVQVWNIKKRSAVRTIPVF-HSVEAIGWVNGQP-EEKILYTAGEGNLILAWDWKSG 265
Score = 24.6 bits (51), Expect = 7.4
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 9/128 (7%)
Frame = +1
Query: 100 LEQMFSKKYKIVTEHAVSLLHSYIHRLD--GTKSLNLAISLSDNSIEIYKL------SDS 255
+E K + T H S+ + LD G + LA S D +++ + L SD
Sbjct: 395 IEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTF-LASSSQDRTLKRFNLGSQLNKSDF 453
Query: 256 SLHQVCRLHGH-KEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVFGSTKMKRK 432
S V + H ++ QV K+ ++ S D +KLWD G V G + R+
Sbjct: 454 SNRAVWTIKAHDRDVNAIQV---SKDGRIIASASQDKTIKLWDSSTGE--VVGVLRGHRR 508
Query: 433 EIPAAPMN 456
+ A N
Sbjct: 509 GVWACSFN 516
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 33.5 bits (73), Expect = 0.016
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 199 NLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFS----PKEDNLLYSTGLDGL 366
N A ++ D SI+ ++ + V ++ K+A L Q S ++ N L S G D
Sbjct: 265 NFATAVLDGSIQFWQKGSRTKRPVMKI---KDAHLPQQGISCLSFSQDGNYLLSRGEDNA 321
Query: 367 VKLWDIRAGGSCV 405
+++WD+R CV
Sbjct: 322 LRVWDLRNSNKCV 334
Score = 27.9 bits (59), Expect = 0.80
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 220 DNSIEI-YKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 384
D S+ + + D + + GH A +T + P + +TG D ++WD+
Sbjct: 173 DGSLIVRFSKGDQYIRNMYNTKGHI-AEITDGCWQPDSSQIFLTTGYDSTARIWDV 227
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 32.7 bits (71), Expect = 0.028
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 181 DGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVF-SPKEDNLLYSTGL 357
DG L +L D + ++ S+SS+ + GHK + ++ + P LY+
Sbjct: 139 DGDVFAWLISTLVDQN-STFETSNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASE 197
Query: 358 DGLVKLWDIRAG 393
D +++WD+ G
Sbjct: 198 DNTIRIWDVSTG 209
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 32.7 bits (71), Expect = 0.028
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
+A + +SI + + S L GH L V + PK + +L S DG +LWD
Sbjct: 162 IATAYRSSSIRLCDMQSGSYTH--SLSGHTGNVLA-VDWCPKNEFVLASGSADGTCRLWD 218
Query: 382 IRAGGSCVFGSTKMKRKEIPAAPMN 456
IR S F + K +P+ N
Sbjct: 219 IRKVSSS-FACMDLHNKYLPSNQTN 242
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 32.7 bits (71), Expect = 0.028
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 259 LHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 393
+H + L GH + V + P N+L S+ D +KLWD G
Sbjct: 124 VHPIAELKGHSRK-VGLVQYHPTAANVLASSSADNTIKLWDCEKG 167
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 32.3 bits (70), Expect = 0.037
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 169 IHRLDGTK---SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNL 339
+H+LD + S L S D I+++ +SS G+ EA VVFSP E N
Sbjct: 137 VHKLDISSFHPSYVLTAS-QDGLIKLWDYKESS--STITFRGNSEAA-RDVVFSPSEPNE 192
Query: 340 LYSTGLDGLVKLWDIR 387
+ G+++ WDIR
Sbjct: 193 FVAAYDSGILQKWDIR 208
Score = 24.6 bits (51), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 358 DGLVKLWDIRAGGSCV 405
DGL+KLWD + S +
Sbjct: 156 DGLIKLWDYKESSSTI 171
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 32.3 bits (70), Expect = 0.037
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 292 EATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVFGSTKM 423
+A + + PK NL + G DG+VK+WD+R + T+M
Sbjct: 546 DAGINMAQWQPK-GNLFVTGGSDGIVKVWDLRLNNPFIQNFTEM 588
Score = 27.9 bits (59), Expect = 0.80
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 283 GHKE-ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSC 402
G KE +T++ + FS K + LY+ D VK+WD+ G C
Sbjct: 295 GEKEYSTISDLCFS-KGNLFLYTGAFDNAVKVWDME-GNLC 333
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 31.5 bits (68), Expect = 0.065
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 298 TLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVFGSTKMKRKEIPAAPMNAW 462
TL V F+ E ++L S G+D + ++D+R TK++ I PM A+
Sbjct: 189 TLPVVKFNYTETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSISWNPMEAF 243
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 31.1 bits (67), Expect = 0.086
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +1
Query: 163 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLL 342
S ++RL + + + + +Y ++ SS + GH +T + F + L
Sbjct: 41 SQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTN-NVTAIAFHC-DGKWL 98
Query: 343 YSTGLDGLVKLWDIRA 390
++ DG VK+WD+RA
Sbjct: 99 ATSSEDGTVKVWDMRA 114
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.1 bits (67), Expect = 0.086
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 190 KSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLV 369
KS +LA + D +I IY + + + + + H TQV + +N L STG D +
Sbjct: 533 KSTHLATASLDTNIHIYSV-ERPMKYIAMKNAHSLGA-TQVEWV--SENELLSTGSDAAI 588
Query: 370 KLWDI 384
K+W +
Sbjct: 589 KVWSV 593
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 30.7 bits (66), Expect = 0.11
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 199 NLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLW 378
NL I+++DN I + D+ L Q C L V +P L ++ G + ++LW
Sbjct: 246 NLYIAVNDNGIAF--ICDNRLQQTCSKTVKASNPLFSVRHNPSIATL-FALGSEQDLQLW 302
Query: 379 DIRAGGSCVFGSTK 420
D+R VF +++
Sbjct: 303 DLRNLNKSVFNTSE 316
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 30.7 bits (66), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLW 378
L S D +I+ + D S V GH ++ + +PK+ N S+ LDG VK+W
Sbjct: 113 LLTSSDDMTIKCFNW-DMSWKCVQTFEGHSRYVMSLAI-NPKDTNTFASSCLDGTVKVW 169
Score = 25.0 bits (52), Expect = 5.6
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 205 AISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDN-LLYSTGLDGLVKLWD 381
A S D +++++ S + + H + + V + P D L + G D L+K+WD
Sbjct: 158 ASSCLDGTVKVWSFGSSVANFTLQAH---DRGVNYVNYYPAGDKPYLITAGDDNLIKVWD 214
Query: 382 IRAGGSCV 405
+ +CV
Sbjct: 215 YQT-KACV 221
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 30.3 bits (65), Expect = 0.15
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 160 HSYIHRLDGTK-SLN-LAISLSDNSIEIYKL----SDSSLHQVCRLHGHKEATLTQVVFS 321
H+ I+ +D K SLN A D+ I I++L S + + + L H +A + V F+
Sbjct: 18 HTPIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYLSTLSRHTQA-VNVVRFN 76
Query: 322 PKEDNLLYSTGLDGLVKLW 378
P E N+L + G +G + LW
Sbjct: 77 P-EGNILATAGDEGTIMLW 94
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 30.3 bits (65), Expect = 0.15
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 295 ATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 387
A + + +SP E N+ S DG ++WD+R
Sbjct: 292 AAVEDLQWSPSEKNVFSSCSCDGTFRIWDVR 322
Score = 28.3 bits (60), Expect = 0.60
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 241 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 384
K S S V H+ A + + + P ED+++ G D + LWD+
Sbjct: 371 KSSSSVATPVASFKWHR-APIYSIEWHPNEDSVIGVVGADNQISLWDL 417
Score = 24.2 bits (50), Expect = 9.8
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 220 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLD-GLVKLWDIRA 390
D + I+ + + ++ H + + ++ + NLL +TG D G+ +WD+R+
Sbjct: 313 DGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLL-ATGADNGVWSVWDLRS 369
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.9 bits (64), Expect = 0.20
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 301 LTQVVFSPKEDNLLYSTGLDGLVKLWDIR 387
+T + F PK+D S LD ++LW I+
Sbjct: 352 VTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.20
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 163 SYIHRLDGTKSLNLAISLS-DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNL 339
+Y+ +D L +S S D ++ I+ L D + ++ L H E ++ + + + L
Sbjct: 139 NYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRM--LPAHSEPIISVSISA--DGTL 194
Query: 340 LYSTGLDGLVKLWDIRAG 393
+ DG+ ++WD+ +G
Sbjct: 195 CATASYDGMARIWDVLSG 212
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 29.5 bits (63), Expect = 0.26
Identities = 22/86 (25%), Positives = 42/86 (48%)
Frame = +1
Query: 136 TEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVV 315
T+ ++L +H + LA DN++ I+ + +L + L GH A +T V
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTL--LFTLSGHT-APITCVR 276
Query: 316 FSPKEDNLLYSTGLDGLVKLWDIRAG 393
+ + N +YS+ D +++WD + G
Sbjct: 277 WGGQ--NWIYSSSYDKTIRIWDAKDG 300
Score = 25.8 bits (54), Expect = 3.2
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
+A + D+S+ ++ + L GH A + Q +S + LL S+ D +K+WD
Sbjct: 404 IATASFDSSVRLWDGKTGKF--LATLRGHV-AAVYQCAWST-DSRLLVSSSQDTTLKVWD 459
Query: 382 IRA 390
+R+
Sbjct: 460 VRS 462
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 277 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
++GH + T+ FSP + L + D +LWD
Sbjct: 130 MNGH-DGTIISAQFSPSTSSRLVTGSGDFTARLWD 163
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.5 bits (63), Expect = 0.26
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 199 NLAISLSDNSIEIYKLSDSSL-HQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKL 375
N A L+ +S + +L D H V +GH + +T V +P + + + S +GL+ L
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQP-VTAVAIAP-DGHTMASADSEGLIHL 531
Query: 376 WDIRAG 393
WDI G
Sbjct: 532 WDIGTG 537
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.35
Identities = 27/92 (29%), Positives = 36/92 (39%)
Frame = +1
Query: 127 KIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLT 306
K+V H + L K LA+ I I+ + S V L GH E
Sbjct: 156 KVVQLHDFGATNHVTSVLWTGKGTQLAVGTDSGVIYIWDIE--STKSVRSLKGHSE---- 209
Query: 307 QVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSC 402
+V DN L S G D ++ D+RA G C
Sbjct: 210 RVAALAWNDNTLTSGGKDEVILHHDLRAPGCC 241
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 29.1 bits (62), Expect = 0.35
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 163 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQV 312
+Y+ L+ + NL IS+ ++ IEI + S S LH+V + K L Q+
Sbjct: 515 NYLLELEKSPKNNLLISMDESVIEIVQKSLSVLHKVTKKIDKKAQHLQQL 564
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 29.1 bits (62), Expect = 0.35
Identities = 22/90 (24%), Positives = 43/90 (47%)
Frame = +1
Query: 115 SKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKE 294
S+ Y + + L + + DG + + A D I+++ ++ + H
Sbjct: 328 SESYVLKQQSHYDALSTLQYSSDGQRIITGA---DDGKIKVWDMNSGFC--IVTFTQHTS 382
Query: 295 ATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 384
A ++ + FS K N+L+S+ LDG V+ WD+
Sbjct: 383 A-VSGLCFS-KRGNVLFSSSLDGSVRAWDL 410
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 0.46
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 301 LTQVVFSPKEDNLLYSTGLDGLVKLWD 381
+T + F PK++ LL + +DGLV L D
Sbjct: 149 ITHLQFHPKDNELLLTGSVDGLVSLLD 175
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 0.60
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 328 EDNLLYSTGLDGLVKLWDIRAG 393
+ N LYS D V++WD+R+G
Sbjct: 545 DSNHLYSGSYDNSVRIWDLRSG 566
Score = 26.2 bits (55), Expect = 2.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 331 DNLLYSTGLDGLVKLWDIRAG 393
D + S +DGL+++WD+R G
Sbjct: 506 DAAVASGTVDGLIRIWDLRIG 526
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 28.3 bits (60), Expect = 0.60
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 113 SVRSIKLLRNMLFLFYTRIYTDWTEQNL*TWPLVSQTTQLKYTNLVIRHCIKFVACMDTR 292
S+ +L N++F F + + Q L + ++ T++LK+TN+ H +K ++
Sbjct: 999 SLDGFRLAMNVIFFFSMDLPRNAFMQTLTKFTHLNNTSELKWTNM---HALK--TLLEIS 1053
Query: 293 RQH*HKLCLVLRKTIYC-TQLDLMDL*SCGI 382
H KL + + C +QL+ + L S G+
Sbjct: 1054 LAHGDKLRDSWKDVLLCISQLERVQLISAGV 1084
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 27.9 bits (59), Expect = 0.80
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
LA + +D ++ ++ L + ++ L GH++ + +SP ++ +L S+ D V +WD
Sbjct: 297 LATASADKTVALWDLRNP-YQRLHTLEGHEDEVYG-LEWSPHDEPILASSSTDRRVCIWD 354
Query: 382 IRAGG 396
+ G
Sbjct: 355 LEKIG 359
Score = 27.5 bits (58), Expect = 1.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 277 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 387
+ H +A + V +P D LL + D V LWD+R
Sbjct: 277 IQAHSKA-INAVAINPFNDYLLATASADKTVALWDLR 312
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 349 TGLDGLVKLWDIRAG 393
+G DG VKLWD+R G
Sbjct: 644 SGNDGSVKLWDVRTG 658
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 27.5 bits (58), Expect = 1.1
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +1
Query: 49 DIVDNEENDRDTVEPEELEQMFSKKYKIVTEHAVSLL-HSYIHRLDGTKSLNLAISLSDN 225
D + NDRD P E++Q +++K T+ + S + ++ H + L+ + S
Sbjct: 56 DSLSQSTNDRDIYSPREIDQ-YTRKVSSRTDPSTSTISNARQHPRNSVSRLSRSSSNVRQ 114
Query: 226 SIEIYKLSDSSLHQVCRLHGHKEATL-TQVVFSPKE-DNLLYSTGLDGLVKLW 378
+I K + + + L G A+L ++ F+ KE N + T G+ +LW
Sbjct: 115 QRDIPK-QNFKVRPLSPLRGQSPASLRSEESFTLKERQNAINKTRAFGM-RLW 165
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.5 bits (58), Expect = 1.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 319 SPKEDNLLYSTGLDGLVKLWDIR 387
S +E N+ +T +DG++ +WD R
Sbjct: 360 SSEESNIFLTTSIDGVMNVWDHR 382
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.5 bits (58), Expect = 1.1
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +1
Query: 220 DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGS 399
D S++++ S+ + +L GH T V + P + LL S D LVK WD R G+
Sbjct: 185 DGSLKVWNFHMST--EELKLTGHGWDVKT-VDWHPSK-GLLASGSKDNLVKFWDPRT-GT 239
Query: 400 CV 405
C+
Sbjct: 240 CI 241
Score = 26.2 bits (55), Expect = 2.4
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPK-EDNLLYSTGLDGLVKLW 378
LA DN ++ + + + LHGHK T+ Q F N L + D +++
Sbjct: 221 LASGSKDNLVKFWDPRTGTC--IATLHGHKN-TIMQASFQKNFGSNYLATVSRDSTCRVF 277
Query: 379 DIRA 390
D+RA
Sbjct: 278 DLRA 281
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.1 bits (57), Expect = 1.4
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Frame = +1
Query: 178 LDGTKSLNLAISLSDNSIEIYKL------------SDSSLHQVCRLHGHKEATLTQVVFS 321
+ G ++ L SL +NSIE+Y L +S + GH+ A + + S
Sbjct: 347 IPGNRTPTLVTSLQNNSIEVYALDVKSEGSAAPLTERASRISAIEIPGHR-ADVRTLALS 405
Query: 322 PKEDNLLYSTGLDGLVKLWDIRAGGSCV 405
D +L +G +G +KLW+ + SC+
Sbjct: 406 ANHDVIL--SGANGSLKLWN-KKTTSCI 430
Score = 26.6 bits (56), Expect = 1.8
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 IEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTG-LDGLVKLWDIRAGGSCV 405
+E+Y ++ SSL + R+ H A V D ++T D VKLW +++ V
Sbjct: 459 LEVYDIASSSLIE--RIQAHDGAIWDLAV---GHDGTYFATASADHTVKLWSLKSSFDFV 513
Query: 406 FGSTK 420
G+T+
Sbjct: 514 PGTTR 518
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 27.1 bits (57), Expect = 1.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 223 NSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKL 375
NS+ + SD S+HQ R LTQ F+ N + T L+G+V L
Sbjct: 369 NSVNVVSSSDYSVHQSSR------PNLTQRAFTSPTLNTMGRTALNGMVGL 413
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.1 bits (57), Expect = 1.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 331 DNLLYSTGLDGLVKLWDI 384
D+ L+S LDG +K WDI
Sbjct: 444 DSRLFSCSLDGTIKQWDI 461
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 1.4
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 181 DGTKSLNLAISLSDNSIEIYKLSDS-SLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGL 357
D TK+L A+ D S ++ +S + + R+ + + + + F K D+L+
Sbjct: 120 DETKTL--AVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCA- 175
Query: 358 DGLVKLWDIRAGGSCVFGSTKMKR 429
DG++K+WD+ S + ++ R
Sbjct: 176 DGVIKVWDLSTPNSAIISRMQVDR 199
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 283 GHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGS 399
GH E + + P + +L+ S G D + ++WD+R+G S
Sbjct: 305 GHSEGIFS-IACQP-DGSLVSSGGNDAIGRIWDLRSGKS 341
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 277 LHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAGGSCVFGSTKMKR 429
L GHK ++ + SP+ + S D ++WD+RA ++ ++ ++
Sbjct: 351 LSGHKNL-VSGLSASPENPYMFASVSHDNTCRVWDVRATSGSIYTISRAEK 400
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 265 QVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 393
Q+C+L GHK+ ++ + +S + + + G+D V+LW G
Sbjct: 96 QICQLTGHKD-SIVAIDWS-FDGTYIATGGMDSQVRLWKSSTG 136
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/70 (21%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHK-------EATLTQVVFSPKEDNLLYSTGLD 360
+AI+ +D ++ Y L L R+ G+ + + ++V+ + LYS +
Sbjct: 448 IAIAYNDGNVRFYDLDTQILVSQMRIAGNSAIGNPAVKDRINKIVWKNGNPDRLYSLHEN 507
Query: 361 GLVKLWDIRA 390
G+V+++D+++
Sbjct: 508 GMVRVFDVKS 517
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 241 KLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDI 384
K S S+ + +H + ATL +P S+G DG V LW +
Sbjct: 330 KGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 1.8
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 193 SLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGL-DGLV 369
SL+ A + DN EI+ + SL Q R E + Q F + N+L +T L +G+
Sbjct: 335 SLSKAFFIFDNQNEIFNFNSDSLQQQFR---QGEEIVKQSFFQVPDYNILVATLLREGIE 391
Query: 370 KLWD 381
L D
Sbjct: 392 NLKD 395
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 262 HQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRA 390
+ V L+ + + V NLL T DGL K WD R+
Sbjct: 137 NSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFRS 179
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.6 bits (56), Expect = 1.8
Identities = 22/77 (28%), Positives = 32/77 (41%)
Frame = +1
Query: 163 SYIHRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLL 342
S H + S +A++ D I I + + V L GH LT FS L
Sbjct: 532 SITHAIYQHSSDLVAVACDDFGIRIVDVQTRKI--VRELWGHSNR-LTSFDFSDT-GRWL 587
Query: 343 YSTGLDGLVKLWDIRAG 393
+ LDG ++ WD+ G
Sbjct: 588 VTASLDGTIRTWDLPTG 604
Score = 25.4 bits (53), Expect = 4.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 331 DNLLYSTGLDGLVKLWDIRAG 393
+ +L + LDG++K WD G
Sbjct: 501 NRILVTASLDGILKFWDFNKG 521
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 26.2 bits (55), Expect = 2.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 106 QMFSKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSDNSIE 234
+MF + K + +HA+ L SYI + KS+ + + D + E
Sbjct: 285 EMFDRIQKAINDHALRLSRSYIIKHAIKKSVIVQVDNVDQAFE 327
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 26.2 bits (55), Expect = 2.4
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 172 HRLDGTKSLNLAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPK 327
H L T ++L + NS+E SD Q+ L + + V+ SPK
Sbjct: 3 HELSSTPQIDLLNDILKNSVESNVFSDYQKKQIVTLILKSKISTAIVLLSPK 54
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 26.2 bits (55), Expect = 2.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 220 DNSIEIYKL-SDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIRAG 393
DN I+I+++ D SL + GH + + FS + L ST D +KLWD G
Sbjct: 288 DNQIKIWEVYHDRSLLRT--FQGHARP-IRDLSFSQDGRSFL-STSFDKTIKLWDTELG 342
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 301 LTQVVFSPKEDNLLYSTGLDGLVKLWDIR 387
LT V + ++ ++ G+DG +K+WD+R
Sbjct: 180 LTAVAIA-QQGTQVFIGGIDGAIKIWDLR 207
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 26.2 bits (55), Expect = 2.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 202 LAISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWD 381
L S +D ++ ++ + V R H E +T V F P +D S LD ++LW
Sbjct: 269 LLTSSADRTVRLWHPKSTKSLAVFR---HNEI-VTCVAFHPIDDRYFVSGSLDCKIQLWS 324
Query: 382 I 384
I
Sbjct: 325 I 325
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.2 bits (55), Expect = 2.4
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 340 LYSTGLDGLVKLWDIRAGGSCVFGST 417
L S DG VKLWDIR S ST
Sbjct: 1194 LISASSDGEVKLWDIRMNHSLQTFST 1219
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 25.8 bits (54), Expect = 3.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 253 SSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTG 354
S +H+ H K +LT F+P+ +LLY+TG
Sbjct: 711 SGIHRSLGTHITKIRSLTLDKFNPETVDLLYATG 744
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 3.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +1
Query: 208 ISLSDNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGLDGLVKLWDIR 387
+S+SD+S I + ++ ++ + +T F P N L + G +KL D+R
Sbjct: 204 LSISDHSFNIVDIKPENMEELTEV-------ITSAEFHPINCNHLMYSSSKGNIKLLDLR 256
Query: 388 AGGSC 402
C
Sbjct: 257 QSALC 261
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 334 NLLYSTGLDGLVKLWDIRAGG 396
N+L + G D K+WDIRA G
Sbjct: 313 NILATGGQDTTAKVWDIRALG 333
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 25.0 bits (52), Expect = 5.6
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 67 ENDRDTVEPEELEQMFSKKYKIVTEHAVSLLHSYIHRLD--GTKSLNLAISLSDNSIEIY 240
E+ R V +++Q+F ++ EH+VSLL +++ K LA+ + D SIE
Sbjct: 436 ESIRTAVSNTQVDQLFHVRHTRSLEHSVSLLAEMTKQINLFYEKRKTLAV-IPDLSIEA- 493
Query: 241 KLSDSSLHQVCRL 279
K +S Q+ ++
Sbjct: 494 KTYESLREQLLKI 506
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 24.6 bits (51), Expect = 7.4
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 187 TKSLNLAISLS---DNSIEIYKLSDSSLHQVCRLHGHKEATLTQVVFSPKEDNLLYSTGL 357
T + N+ +S S D S+ ++ L+ S + + L + F E ++ +G
Sbjct: 666 TFNQNILVSASAPPDTSLRVWDLNTGSCRDILK------CPLGHIFFQHDESKVV--SGS 717
Query: 358 DGLVKLWDIRAG 393
++LWDIR+G
Sbjct: 718 HSTLQLWDIRSG 729
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 100 LEQMFSKKYKIVTEHAVSLLHSYIHRLD 183
L Q+F K +K+ E SLLH+ LD
Sbjct: 11 LSQIFDKSWKVRFEAYESLLHALNRALD 38
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 24.6 bits (51), Expect = 7.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 334 NLLYSTGLDGLVKLWDIRAGGSCVF 408
N L S G DG++++W++ G CV+
Sbjct: 392 NWLASGGDDGVLRIWEVMT-GRCVW 415
>SPAC144.15c |cog1||Golgi transport complex subunit Cog1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 701
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -2
Query: 150 NSMFRNNFILLTEHLLQFFGLY 85
NS+ +N+FI+ + +++ GLY
Sbjct: 349 NSILQNHFIISSRNIIDSLGLY 370
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +1
Query: 94 EELEQMFSKKYKIVTEHAVSLLHSYIHRLD 183
++ E+++ + I+ EH++ S+ H+LD
Sbjct: 419 DKYERLYPSRRSILQEHSLYASESFQHKLD 448
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 24.2 bits (50), Expect = 9.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 325 KEDNLLYSTGLDGLVKLWDIR 387
++ + + G D L+K+WD+R
Sbjct: 275 RDGRYMVTAGADSLLKVWDLR 295
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.2 bits (50), Expect = 9.8
Identities = 15/70 (21%), Positives = 36/70 (51%)
Frame = +1
Query: 43 MADIVDNEENDRDTVEPEELEQMFSKKYKIVTEHAVSLLHSYIHRLDGTKSLNLAISLSD 222
++D+ E +++ +E Q S KYK + + ++++ Y H +L AI ++
Sbjct: 942 LSDLSSTLEKKLSSIKKDE--QTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAI--NE 997
Query: 223 NSIEIYKLSD 252
++ I +L++
Sbjct: 998 KNLNIRELNE 1007
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,969,612
Number of Sequences: 5004
Number of extensions: 39872
Number of successful extensions: 244
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -