Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2228
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   0.92 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   1.6  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            22   2.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.5  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 175 RLDGTKSLNLAISLSDNSIEIYKLSDSS 258
           +LD T+  +L ISLS+N      +SDS+
Sbjct: 525 QLDSTELADLDISLSENLSSGLSISDST 552


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 26  KYCYKLWLILLITK-KMTEIL*SPKNWSKCSVRSIKLLRN 142
           KYC  + L +  T  KMT IL  P  +  C VR IK +++
Sbjct: 109 KYCGNITLNIESTSNKMTVILTPPGRFF-CEVRPIKRVKD 147


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 462 PCIHRGSRYFFPLHLCT 412
           P  H GS Y+   HLCT
Sbjct: 31  PKDHNGSIYWSMYHLCT 47


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 188 VPSNRCIYECRRETACSV 135
           VP    IYEC +   C +
Sbjct: 465 VPPGTPIYECNKRCNCDI 482


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 79  LGHFLRYQQYQP 44
           L +FLRY++ QP
Sbjct: 428 LSYFLRYKKLQP 439


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 79  LGHFLRYQQYQP 44
           L +FLRY++ QP
Sbjct: 428 LSYFLRYKKLQP 439


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,566
Number of Sequences: 438
Number of extensions: 2522
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)