Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2227
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.1  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 137 NFTSHSFQTWYQ*RRKSFKE 196
           N T    + W+Q RR  FK+
Sbjct: 123 NLTERQIKIWFQNRRMKFKK 142


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 137 NFTSHSFQTWYQ*RRKSFKE 196
           N T    + W+Q RR  FK+
Sbjct: 143 NLTERQIKIWFQNRRMKFKK 162


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 291 ASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELD 404
           A LYG E  +KQ  K+  LR +  A     I  R ELD
Sbjct: 7   AQLYGNELHIKQISKW--LRGSARAQE---IQKRSELD 39


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 291 ASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELD 404
           A LYG E  +KQ  K+  LR +  A     I  R ELD
Sbjct: 7   AQLYGNELHIKQISKW--LRGSARAQE---IQKRSELD 39


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 291 ASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELD 404
           A LYG E  +KQ  K+  LR +  A     I  R ELD
Sbjct: 7   AQLYGNELHIKQISKW--LRGSARAQE---IQKRSELD 39


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 387 LILFSCCLHTLLA 349
           L++F CCL T+ A
Sbjct: 247 LVIFDCCLETVSA 259


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 488 VQAVSKVELDMSLPQVCVY 544
           V A S VE + ++PQ C++
Sbjct: 733 VNATSLVESNRNVPQKCIF 751


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 121 WRSTIKLYIS*LPNLVSVT 177
           WR T+ ++++  PN   VT
Sbjct: 656 WRQTLAMWLNHNPNYAEVT 674


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 387 LILFSCCLHTLL 352
           LILFSC LH ++
Sbjct: 273 LILFSCLLHLVV 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,430
Number of Sequences: 336
Number of extensions: 2574
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)