Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2227
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063565-1|AAH63565.1| 252|Homo sapiens origin recognition comp... 57 6e-08
BC039032-1|AAH39032.1| 252|Homo sapiens origin recognition comp... 57 6e-08
AK024077-1|BAB14817.1| 150|Homo sapiens protein ( Homo sapiens ... 57 6e-08
AF139658-1|AAD32666.1| 252|Homo sapiens origin recognition comp... 57 6e-08
U53445-1|AAA98972.1| 752|Homo sapiens DOC1 protein. 35 0.19
BC027860-1|AAH27860.1| 893|Homo sapiens filamin A interacting p... 35 0.19
AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protei... 35 0.19
AF514869-1|AAQ08179.1| 1133|Homo sapiens GPBP-interacting protei... 35 0.19
AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protei... 35 0.19
AF514867-1|AAQ08177.1| 1135|Homo sapiens GPBP-interacting protei... 35 0.19
AF329092-1|AAN16206.1| 764|Homo sapiens GPBP-interacting protei... 35 0.19
>BC063565-1|AAH63565.1| 252|Homo sapiens origin recognition
complex, subunit 6 like (yeast) protein.
Length = 252
Score = 56.8 bits (131), Expect = 6e-08
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 IASKLGISDEEKVLRKAAEFERLLETKSTA-GSNITDTSKVVICLDLAASLYGTEFDVKQ 326
+A +LG+++ + +LRKA E+ RL K + T+TS V+CLDLAAS D
Sbjct: 9 LAPRLGLAEPD-MLRKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAASWMKCPLDRAY 67
Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA--LAEKILEQYKQS 500
IK SGL Y + K L L+ ++ + ++Q S ++A +A KIL+ Y+ S
Sbjct: 68 LIKLSGLNKETYQSCLKSFECLLGLN---SNIGIRDLAVQFSCIEAVNMASKILKSYESS 124
Query: 501 V 503
+
Sbjct: 125 L 125
>BC039032-1|AAH39032.1| 252|Homo sapiens origin recognition
complex, subunit 6 like (yeast) protein.
Length = 252
Score = 56.8 bits (131), Expect = 6e-08
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 IASKLGISDEEKVLRKAAEFERLLETKSTA-GSNITDTSKVVICLDLAASLYGTEFDVKQ 326
+A +LG+++ + +LRKA E+ RL K + T+TS V+CLDLAAS D
Sbjct: 9 LAPRLGLAEPD-MLRKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAASWMKCPLDRAY 67
Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA--LAEKILEQYKQS 500
IK SGL Y + K L L+ ++ + ++Q S ++A +A KIL+ Y+ S
Sbjct: 68 LIKLSGLNKETYQSCLKSFECLLGLN---SNIGIRDLAVQFSCIEAVNMASKILKSYESS 124
Query: 501 V 503
+
Sbjct: 125 L 125
>AK024077-1|BAB14817.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ14015 fis, clone HEMBA1000327. ).
Length = 150
Score = 56.8 bits (131), Expect = 6e-08
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 IASKLGISDEEKVLRKAAEFERLLETKSTA-GSNITDTSKVVICLDLAASLYGTEFDVKQ 326
+A +LG+++ + +LRKA E+ RL K + T+TS V+CLDLAAS D
Sbjct: 9 LAPRLGLAEPD-MLRKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAASWMKCPLDRAY 67
Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA--LAEKILEQYKQS 500
IK SGL Y + K L L+ ++ + ++Q S ++A +A KIL+ Y+ S
Sbjct: 68 LIKLSGLNKETYQSCLKSFECLLGLN---SNIGIRDLAVQFSCIEAVNMASKILKSYESS 124
Query: 501 V 503
+
Sbjct: 125 L 125
>AF139658-1|AAD32666.1| 252|Homo sapiens origin recognition complex
subunit 6 protein.
Length = 252
Score = 56.8 bits (131), Expect = 6e-08
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 IASKLGISDEEKVLRKAAEFERLLETKSTA-GSNITDTSKVVICLDLAASLYGTEFDVKQ 326
+A +LG+++ + +LRKA E+ RL K + T+TS V+CLDLAAS D
Sbjct: 9 LAPRLGLAEPD-MLRKAEEYLRLSRVKCVGLSARTTETSSAVMCLDLAASWMKCPLDRAY 67
Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA--LAEKILEQYKQS 500
IK SGL Y + K L L+ ++ + ++Q S ++A +A KIL+ Y+ S
Sbjct: 68 LIKLSGLNKETYQSCLKSFECLLGLN---SNIGIRDLAVQFSCIEAVNMASKILKSYESS 124
Query: 501 V 503
+
Sbjct: 125 L 125
>U53445-1|AAA98972.1| 752|Homo sapiens DOC1 protein.
Length = 752
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 221 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 280
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 281 VTEKLIEETKRALK 294
>BC027860-1|AAH27860.1| 893|Homo sapiens filamin A interacting
protein 1-like protein.
Length = 893
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 235 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 294
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 295 VTEKLIEETKRALK 308
>AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protein
130d protein.
Length = 1135
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 475 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 534
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 535 VTEKLIEETKRALK 548
>AF514869-1|AAQ08179.1| 1133|Homo sapiens GPBP-interacting protein
130c protein.
Length = 1133
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 475 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 534
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 535 VTEKLIEETKRALK 548
>AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protein
130b protein.
Length = 1133
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 475 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 534
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 535 VTEKLIEETKRALK 548
>AF514867-1|AAQ08177.1| 1135|Homo sapiens GPBP-interacting protein
130a protein.
Length = 1135
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 475 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 534
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 535 VTEKLIEETKRALK 548
>AF329092-1|AAN16206.1| 764|Homo sapiens GPBP-interacting protein
90 protein.
Length = 764
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/74 (22%), Positives = 40/74 (54%)
Frame = +3
Query: 285 LAASLYGTEFDVKQAIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQA 464
+ + L TEF +K+ + ++ + +K +S +L+ D+L A ++ + V
Sbjct: 475 IESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTT 534
Query: 465 LAEKILEQYKQSVK 506
+ EK++E+ K+++K
Sbjct: 535 VTEKLIEETKRALK 548
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,461,802
Number of Sequences: 237096
Number of extensions: 1377027
Number of successful extensions: 2785
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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