Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2227
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071443-1|AAL49065.1|  257|Drosophila melanogaster RE52740p pro...    79   6e-15
AE013599-940|AAF58890.1|  257|Drosophila melanogaster CG1584-PA ...    79   6e-15
AF139064-1|AAD39474.1|  257|Drosophila melanogaster origin recog...    76   3e-14
BT010020-1|AAQ22489.1| 1051|Drosophila melanogaster RE11449p pro...    31   1.2  
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.     31   1.2  
AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-l...    31   1.2  
AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-l...    31   1.2  
AE014297-2675|ABI31179.1| 1051|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2673|AAF55676.3| 1669|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-P...    31   1.2  
AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-P...    31   1.2  
AY061610-1|AAL29158.1|  628|Drosophila melanogaster SD07532p pro...    29   3.8  
AJ580980-1|CAE45726.1|  630|Drosophila melanogaster PNUTSDm prot...    29   3.8  
AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm prot...    29   3.8  
AE014134-178|AAN10490.1|  593|Drosophila melanogaster CG33526-PC...    29   3.8  
AE014134-177|AAF51438.2|  628|Drosophila melanogaster CG33526-PB...    29   3.8  
AE014134-176|AAF51439.2|  628|Drosophila melanogaster CG33526-PA...    29   3.8  
AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD...    29   3.8  
AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-P...    29   6.6  
AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p pro...    28   8.7  
AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA...    28   8.7  

>AY071443-1|AAL49065.1|  257|Drosophila melanogaster RE52740p
           protein.
          Length = 257

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = +3

Query: 150 IASKLGISDEEKVLRKAAEFERLLETKST-AGSNITDTSKVVICLDLAASLYGTEFDVKQ 326
           + +K+G+ +E  VL K  E  RLLE +ST     I +  K+V+C DLA+ + G  FD +Q
Sbjct: 8   LITKMGLREEPNVLEKTTELVRLLELRSTNVPLQINEYGKIVLCADLASCMIGIAFDKEQ 67

Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYK 494
           A+K SGLR + Y N+K++    L+L+    SV  +C  L  + V   AE+++  +K
Sbjct: 68  ALKLSGLRKSQYLNNKRMFEKLLDLN-KLASVNDICVQLGLNEVARKAEELMTLFK 122


>AE013599-940|AAF58890.1|  257|Drosophila melanogaster CG1584-PA
           protein.
          Length = 257

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
 Frame = +3

Query: 150 IASKLGISDEEKVLRKAAEFERLLETKST-AGSNITDTSKVVICLDLAASLYGTEFDVKQ 326
           + +K+G+ +E  VL K  E  RLLE +ST     I +  K+V+C DLA+ + G  FD +Q
Sbjct: 8   LITKMGLREEPNVLEKTTELVRLLELRSTNVPLQINEYGKIVLCADLASCMIGIAFDKEQ 67

Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYK 494
           A+K SGLR + Y N+K++    L+L+    SV  +C  L  + V   AE+++  +K
Sbjct: 68  ALKLSGLRKSQYLNNKRMFEKLLDLN-KLASVNDICVQLGLNEVARKAEELMTLFK 122


>AF139064-1|AAD39474.1|  257|Drosophila melanogaster origin
           recognition complex subunit6 protein.
          Length = 257

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +3

Query: 150 IASKLGISDEEKVLRKAAEFERLLETKST-AGSNITDTSKVVICLDLAASLYGTEFDVKQ 326
           + +K+G+ +E  VL K  E  RLLE +ST     I +  K+V+C DLA+ + G  FD +Q
Sbjct: 8   LITKMGLREEPNVLEKTTELVRLLELRSTNVPLQINEYGKIVLCADLASCMIGIAFDKEQ 67

Query: 327 AIKYSGLRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYK 494
           A+K S LR + Y N+K++    L+L+    SV  +C  L  + V   AE+++  +K
Sbjct: 68  ALKLSALRKSQYLNNKRMFEKLLDLN-KLASVNDICVQLGLNEVARKAEELMTLFK 122


>BT010020-1|AAQ22489.1| 1051|Drosophila melanogaster RE11449p
           protein.
          Length = 1051

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
           +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 449 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 495


>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
          Length = 1854

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 1252 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 1298


>AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-like
            protein DLP2 protein.
          Length = 3497

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2895 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2941


>AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-like
            protein DYS protein.
          Length = 3127

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2525 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2571


>AE014297-2675|ABI31179.1| 1051|Drosophila melanogaster CG34157-PE,
           isoform E protein.
          Length = 1051

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345 LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
           +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 449 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 495


>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
            isoform D protein.
          Length = 1854

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 1252 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 1298


>AE014297-2673|AAF55676.3| 1669|Drosophila melanogaster CG34157-PB,
            isoform B protein.
          Length = 1669

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 1067 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 1113


>AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-PG,
            isoform G protein.
          Length = 3504

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2902 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2948


>AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-PC,
            isoform C protein.
          Length = 3127

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2525 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2571


>AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-PA,
            isoform A protein.
          Length = 3497

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2895 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2941


>AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-PH,
            isoform H protein.
          Length = 3598

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2895 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2941


>AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-PF,
            isoform F protein.
          Length = 3529

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +3

Query: 345  LRPTVYANSKKIISNRLELDVDRLSVAVLCASLQNSGVQALAEKILE 485
            +R + Y  + K+ S +  L +DR+S++  C S    G++A  +K+++
Sbjct: 2927 IRFSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLID 2973


>AY061610-1|AAL29158.1|  628|Drosophila melanogaster SD07532p
           protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AJ580980-1|CAE45726.1|  630|Drosophila melanogaster PNUTSDm protein
           protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AJ580979-1|CAE45725.1| 1135|Drosophila melanogaster PNUTSDm protein
           protein.
          Length = 1135

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AE014134-178|AAN10490.1|  593|Drosophila melanogaster CG33526-PC,
           isoform C protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 69  NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 110


>AE014134-177|AAF51438.2|  628|Drosophila melanogaster CG33526-PB,
           isoform B protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AE014134-176|AAF51439.2|  628|Drosophila melanogaster CG33526-PA,
           isoform A protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AE014134-175|AAN10491.2| 1135|Drosophila melanogaster CG33526-PD,
           isoform D protein.
          Length = 1135

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 387 NRLELDVDRLSVAVLCASLQNSGVQALAEKILEQYKQSVK*N 512
           NRL+++   + V  LC    N GV+ LA++++EQ+ + V  N
Sbjct: 104 NRLKINSAPILVKGLCKDGGNEGVRILAKRLVEQWLKIVTEN 145


>AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-PB,
           isoform B protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 274 ITTLLVSVMLLPAVDFVSKSRSNSAAFLKTFSSSLIP 164
           I TL + V+++  +DF S   S+S +   T+SSS  P
Sbjct: 214 IGTLCIVVLVICCLDFSSSQNSSSTSTSPTYSSSSTP 250


>AY051962-1|AAK93386.1| 1487|Drosophila melanogaster LD42916p
           protein.
          Length = 1487

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -3

Query: 407 DIQF*SI*YYFLAVCIHCWPQTRILNCLLNIKFSTIQTSSQVQAYNNFTCIS 252
           +++F S   Y  A+C++ W  T +L CLL    S +  +  + A   +T ++
Sbjct: 501 ELRFLSKRKYLDAMCVYFWATTPVLMCLLTFGVSVLMGNPLI-ASTTYTSVA 551


>AE014134-1458|AAF52639.1| 1487|Drosophila melanogaster CG7806-PA
           protein.
          Length = 1487

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -3

Query: 407 DIQF*SI*YYFLAVCIHCWPQTRILNCLLNIKFSTIQTSSQVQAYNNFTCIS 252
           +++F S   Y  A+C++ W  T +L CLL    S +  +  + A   +T ++
Sbjct: 501 ELRFLSKRKYLDAMCVYFWATTPVLMCLLTFGVSVLMGNPLI-ASTTYTSVA 551


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,977,558
Number of Sequences: 53049
Number of extensions: 405633
Number of successful extensions: 1046
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)