Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2222
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.9  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -3

Query: 441 RGKQKSRQQTLTLDFYSLSLTPGCTANHSLETKN---KF*IQKLSLSLNDLKANDVKLRE 271
           +G    R   +TLD   L L   C  N  + TKN    F + K++ +  D KA    L E
Sbjct: 20  KGDPTERDLIVTLDDRDLWLRFECLTNEMIVTKNGRRMFPVVKVTAAGLDPKAMYTVLLE 79

Query: 270 VIE 262
            ++
Sbjct: 80  FVQ 82


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +2

Query: 398 KSKVNVCCRDFCFPRSSSDVSHPPATRECPHHFFIRSQCLSGID 529
           +SKVN C    C         H      CP  F+ ++   SG D
Sbjct: 336 ESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYGKNCEFSGYD 379


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 207 FACFR*YNFFFEIAYFY 157
           F C   Y++FF ++Y Y
Sbjct: 79  FLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 207 FACFR*YNFFFEIAYFY 157
           F C   Y++FF ++Y Y
Sbjct: 35  FLCLPFYSYFFYLSYIY 51


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 471 AGGWDTSLDDRGK 433
           AGGW T  DD  K
Sbjct: 312 AGGWTTVWDDEQK 324


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 265 NNFAKFYVVRF*II*R 312
           +NF +FY  RF +I R
Sbjct: 314 DNFPRFYAARFFVINR 329


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 265 NNFAKFYVVRF*II*R 312
           +NF +FY  RF +I R
Sbjct: 314 DNFPRFYAARFFVINR 329


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 423 VISASLGRQVTYPIPQ 470
           V   S GRQ  YP PQ
Sbjct: 341 VARMSRGRQYNYPNPQ 356


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 141 CKLTLYVTLSISFFISVSFKANS 73
           C+L   + L ISFF++     N+
Sbjct: 136 CELFFVILLWISFFLNFMLHCNN 158


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 423 VISASLGRQVTYPIPQ 470
           V   S GRQ  YP PQ
Sbjct: 289 VARMSRGRQYNYPNPQ 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,953
Number of Sequences: 336
Number of extensions: 2038
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)