Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2222
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061242-1|AAL28790.1|  387|Drosophila melanogaster LD18356p pro...    32   0.48 
AF294396-1|AAG02486.1|  387|Drosophila melanogaster IkappaB kina...    32   0.48 
AE013599-3957|AAF47273.2|  387|Drosophila melanogaster CG16910-P...    32   0.48 
Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein...    28   7.9  
AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p pro...    28   7.9  
AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB...    28   7.9  
AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA...    28   7.9  

>AY061242-1|AAL28790.1|  387|Drosophila melanogaster LD18356p
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/33 (39%), Positives = 26/33 (78%)
 Frame = -3

Query: 360 HSLETKNKF*IQKLSLSLNDLKANDVKLREVIE 262
           ++ E+K++  I+K+ L +N+LKA D++ +EVI+
Sbjct: 236 YATESKSQELIKKMQLDINELKARDIQKQEVIK 268


>AF294396-1|AAG02486.1|  387|Drosophila melanogaster IkappaB kinase
           gamma protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/33 (39%), Positives = 26/33 (78%)
 Frame = -3

Query: 360 HSLETKNKF*IQKLSLSLNDLKANDVKLREVIE 262
           ++ E+K++  I+K+ L +N+LKA D++ +EVI+
Sbjct: 236 YATESKSQELIKKMQLDINELKARDIQKQEVIK 268


>AE013599-3957|AAF47273.2|  387|Drosophila melanogaster CG16910-PA
           protein.
          Length = 387

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/33 (39%), Positives = 26/33 (78%)
 Frame = -3

Query: 360 HSLETKNKF*IQKLSLSLNDLKANDVKLREVIE 262
           ++ E+K++  I+K+ L +N+LKA D++ +EVI+
Sbjct: 236 YATESKSQELIKKMQLDINELKARDIQKQEVIK 268


>Y14823-1|CAA75100.1|  270|Drosophila melanogaster SURF-4 protein
           protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 405 KSMFAVVISASLGRQVTYPIPQLRGNVHTTFLFVVNVSLELIIWE 539
           +S+FA V   S+G        QL G +   F+F+  +  EL +W+
Sbjct: 140 RSLFAGV--PSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQ 182


>AY118406-1|AAM48435.1|  270|Drosophila melanogaster RE62265p
           protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 405 KSMFAVVISASLGRQVTYPIPQLRGNVHTTFLFVVNVSLELIIWE 539
           +S+FA V   S+G        QL G +   F+F+  +  EL +W+
Sbjct: 140 RSLFAGV--PSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQ 182


>AE014297-2017|AAN13656.1|  270|Drosophila melanogaster CG6202-PB,
           isoform B protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 405 KSMFAVVISASLGRQVTYPIPQLRGNVHTTFLFVVNVSLELIIWE 539
           +S+FA V   S+G        QL G +   F+F+  +  EL +W+
Sbjct: 140 RSLFAGV--PSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQ 182


>AE014297-2016|AAF55176.1|  270|Drosophila melanogaster CG6202-PA,
           isoform A protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 405 KSMFAVVISASLGRQVTYPIPQLRGNVHTTFLFVVNVSLELIIWE 539
           +S+FA V   S+G        QL G +   F+F+  +  EL +W+
Sbjct: 140 RSLFAGV--PSMGENKPKNFMQLAGRILLAFMFITLIRFELSVWQ 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,984,692
Number of Sequences: 53049
Number of extensions: 369821
Number of successful extensions: 958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)