Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2221
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 274 3e-74
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 274 3e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 274 3e-74
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 274 3e-74
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 274 3e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 274 3e-74
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 273 6e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 271 2e-73
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 266 7e-72
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 235 1e-62
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 181 3e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 8e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 149 1e-36
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 120 5e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 2e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 51 5e-07
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.13
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.17
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 25 4.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.5
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 274 bits (672), Expect = 3e-74
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 273 bits (669), Expect = 6e-74
Identities = 124/128 (96%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 271 bits (665), Expect = 2e-73
Identities = 122/128 (95%), Positives = 127/128 (99%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKM 456
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 457 TQIMFETF 480
TQIMFETF
Sbjct: 121 TQIMFETF 128
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 266 bits (652), Expect = 7e-72
Identities = 120/126 (95%), Positives = 125/126 (99%)
Frame = +1
Query: 103 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 282
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 283 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKMTQ 462
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPK++REKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 463 IMFETF 480
IMFETF
Sbjct: 122 IMFETF 127
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 235 bits (576), Expect = 1e-62
Identities = 107/110 (97%), Positives = 109/110 (99%)
Frame = +1
Query: 151 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 330
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 331 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKMTQIMFETF 480
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKA+REKMTQIMFETF
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 114
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKI 354
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKI 354
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDMEKI 354
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 181 bits (441), Expect = 3e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 229 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 408
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 409 LLTEASLNPKAHREKMTQIMFETF 480
LLTEA LNPKA+REKMTQIMFETF
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETF 84
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 8e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 277 SKRGILTLKYPIEHGIVTNWDDM 345
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 149 bits (361), Expect = 1e-36
Identities = 64/121 (52%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = +1
Query: 121 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 300
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 301 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKAHREKMTQIMFET 477
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+A LNP +RE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 478 F 480
F
Sbjct: 131 F 131
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 120 bits (290), Expect = 5e-28
Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 3/123 (2%)
Frame = +1
Query: 121 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 294
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 295 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEASLNPKAHREKMTQIMF 471
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE LNP ++REKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 472 ETF 480
E +
Sbjct: 129 EQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 13/141 (9%)
Frame = +1
Query: 97 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 240
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 241 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 417
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 418 EASLNPKAHREKMTQIMFETF 480
E LN +RE +IMFE+F
Sbjct: 121 EPPLNTPENREYTAEIMFESF 141
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 75.4 bits (177), Expect = 2e-14
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 17/143 (11%)
Frame = +1
Query: 106 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 279
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 280 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 414
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 415 TEASLNPKAHREKMTQIMFETFQ 483
+E+S N +A REK+T+IMFE FQ
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQ 151
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/123 (27%), Positives = 59/123 (47%)
Frame = +1
Query: 112 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 291
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 292 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKMTQIMF 471
++ PIE G V NWD ++IW TF + V + LT+ + A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 472 ETF 480
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/123 (27%), Positives = 59/123 (47%)
Frame = +1
Query: 112 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 291
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 292 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKAHREKMTQIMF 471
++ PIE G V NWD ++IW TF + V + LT+ + A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 472 ETF 480
+ F
Sbjct: 116 DYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.043
Identities = 36/112 (32%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Frame = +3
Query: 192 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 371
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 372 Q*AACRPRGTPSPAY*GFP*PQG-PQREDDPDHVRNISTRP--PMYVAIQAG 518
A P G P PA G P P G P P + P Y AI G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDGNPGTAGPPGKAGGEGEKGICPKYCAIDGG 295
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.13
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Frame = +3
Query: 204 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 383
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 384 CRPRGTPSPAY*GFP*PQG-PQREDDPDHVRNISTRP--PMYVAIQAG 518
P G P PA G P P G P P + P Y AI G
Sbjct: 251 AGPPGPPGPA--GAPGPDGNPGTAGPPGKAGGEGEKGICPKYCAIDGG 296
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 326 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 150
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 149 HIPEPLSTTNAATSSS 102
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical protein
T20G5.1 protein.
Length = 1681
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 367 FYNELRVAPEEHPVLLTEASLNPKAHREKMTQIMFETFQHA 489
F+N+L+ P P L +LN KA E + Q++ + HA
Sbjct: 1440 FFNKLKQIPLVKPYLRQVQNLNNKAINEALNQLLIDEEDHA 1480
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 283 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 128
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 283 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 128
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 204 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIP 308
G P G G +GTEG ++ K YP P P
Sbjct: 510 GPPGPMGLRGPHGTEGETGKQGPEGSKGYPGPMGP 544
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 420 GFP*PQGPQREDDPDHVRNISTRP 491
G+P P GPQ D I RP
Sbjct: 537 GYPGPMGPQGPPGNDGEPGIDGRP 560
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 151 KAGFAGDDAPRAVFPSIVGRPRHQG 225
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 201 RGKAPPSGRDGRYGTEG 251
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 176 ASSPAKPALHIPEPLSTTNAATSS 105
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 176 ASSPAKPALHIPEPLSTTNAATSS 105
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 176 ASSPAKPALHIPEPLSTTNAATSS 105
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 176 ASSPAKPALHIPEPLSTTNAATSS 105
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 336 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 226
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 405
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 405
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,694,235
Number of Sequences: 27780
Number of extensions: 311835
Number of successful extensions: 1138
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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