Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2219
         (619 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056903-1|BAB71306.1|  128|Homo sapiens protein ( Homo sapiens ...    33   1.1  
BC009006-1|AAH09006.1|  325|Homo sapiens TMEM30A protein protein.      31   2.5  
AL080250-4|CAI19900.1|  361|Homo sapiens transmembrane protein 3...    31   2.5  
AK001718-1|BAA91859.1|  361|Homo sapiens protein ( Homo sapiens ...    31   2.5  
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p...    31   3.3  
BC013906-1|AAH13906.1|  316|Homo sapiens FLJ36031 protein protein.     31   4.3  
AK074126-1|BAB84952.1|  677|Homo sapiens FLJ00198 protein protein.     30   5.7  
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.             30   5.7  
AK094821-1|BAC04429.1|  574|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>AK056903-1|BAB71306.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32341 fis, clone PROST2006196. ).
          Length = 128

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 617 PRKASRGPPPAPRGHIRGPGQLPPPHFHS*QSA 519
           PR+  RG P A RG    PG   PPH  + Q+A
Sbjct: 77  PRRRGRGGPGAARGCSGAPGSFRPPHGRASQAA 109


>BC009006-1|AAH09006.1|  325|Homo sapiens TMEM30A protein protein.
          Length = 325

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2

Query: 527 AMNGNAAAEVAPGPECAPGG 586
           AMN NA  EV  GP CAPGG
Sbjct: 2   AMNYNAKDEVDGGPPCAPGG 21


>AL080250-4|CAI19900.1|  361|Homo sapiens transmembrane protein 30A
           protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2

Query: 527 AMNGNAAAEVAPGPECAPGG 586
           AMN NA  EV  GP CAPGG
Sbjct: 2   AMNYNAKDEVDGGPPCAPGG 21


>AK001718-1|BAA91859.1|  361|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10856 fis, clone NT2RP4001547. ).
          Length = 361

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +2

Query: 527 AMNGNAAAEVAPGPECAPGG 586
           AMN NA  EV  GP CAPGG
Sbjct: 2   AMNYNAKDEVDGGPPCAPGG 21


>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
           protein.
          Length = 2715

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
 Frame = +1

Query: 544 GGGSCPGPRMC-------PRGAGGGPLEAFRG 618
           GGGSCPGP          PRGAGGG     RG
Sbjct: 6   GGGSCPGPGSARGRFPGRPRGAGGGGGRGGRG 37


>BC013906-1|AAH13906.1|  316|Homo sapiens FLJ36031 protein protein.
          Length = 316

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 527 AMNGNAAAEVAPGPECAPGGRGAAPLKP 610
           A  G +AA+ APGP   PG  G AP  P
Sbjct: 188 AQPGGSAAQGAPGPASEPGTHGEAPPLP 215


>AK074126-1|BAB84952.1|  677|Homo sapiens FLJ00198 protein protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 609 GFKGAAPRPPGAHSGPGA-TSAAAFPFIAKRRRGKQHKLLGRPPA 478
           G  GAAPRP G H+G GA    AA P  A      Q    G  PA
Sbjct: 630 GTAGAAPRPQGQHAGTGAGPPGAAGPARAAAGPAGQRGGTGGGPA 674


>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
          Length = 1682

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = -2

Query: 591 PRPPGAHSGPGATSAAAFPFIAKRRRGKQHKLLGRPPALAFP 466
           P PP A SGP      + P   KRRRG   +  G PP L  P
Sbjct: 211 PVPPAALSGPSGEEGLS-PG-GKRRRGCNSEQTGLPPGLPLP 250


>AK094821-1|BAC04429.1|  574|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37502 fis, clone BRAWH2016446, moderately
           similar to TAT-BINDING HOMOLOG 7. ).
          Length = 574

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 609 GFKGAAPRP-PGAHSGPGATSAAAFPFIAKRRRGKQHKLLGRPPALA 472
           G K   P P PGA + PGAT  ++  FI+ R R  + +    P A A
Sbjct: 13  GSKSPGPGPGPGAGAEPGATGGSSH-FISSRTRSSKTRAASCPAAKA 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,118,637
Number of Sequences: 237096
Number of extensions: 1765376
Number of successful extensions: 8715
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8645
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)