Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2219
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.59 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.2  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   3.2  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    23   3.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   3.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 585 PPGAHSGPGATSAAAFPFIAKRR 517
           P G+  GPGA +AAA   ++KRR
Sbjct: 151 PTGSSCGPGAAAAAA--LLSKRR 171


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 393 TAVTFTKKCGVTL 431
           T  TFT+ CG+TL
Sbjct: 331 TYFTFTRPCGITL 343


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 516 RGKQHKLLGRPPALAFPEW*NERAFSNFRALR 421
           RGK++ ++       FPE  N+RA   F+ +R
Sbjct: 65  RGKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 516 RGKQHKLLGRPPALAFPEW*NERAFSNFRALR 421
           RGK++ ++       FPE  N+RA   F+ +R
Sbjct: 66  RGKKNSIINDVKNELFPEDINKRAPMGFQGMR 97


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 516 RGKQHKLLGRPPALAFPEW*NERAFSNFRALR 421
           RGK++ ++       FPE  N+RA   F+ +R
Sbjct: 65  RGKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 516 RGKQHKLLGRPPALAFPEW*NERAFSNFRALR 421
           RGK++ ++       FPE  N+RA   F+ +R
Sbjct: 65  RGKKNSIINDVKNELFPEDINKRAPMGFQGMR 96


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 617 PRKASRGPPPAPRGHIRGPGQLPPPH 540
           P   + GP P+P    + P +  PP+
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPN 41


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 324 WNESINWR 301
           WNE +NW+
Sbjct: 103 WNEDLNWQ 110


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -2

Query: 324 WNESINWR 301
           WNE +NW+
Sbjct: 118 WNEDLNWQ 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,605
Number of Sequences: 438
Number of extensions: 3280
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)