Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2216
         (519 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3HS11 Cluster: Sensor histidine kinase; n=1; Algoripha...    37   0.32 
UniRef50_A1ICP6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q57U70 Cluster: Arginine N-methyltransferase, putative;...    33   3.9  
UniRef50_UPI0000E45E11 Cluster: PREDICTED: hypothetical protein;...    32   9.0  
UniRef50_A1EAG3 Cluster: Serpin 17; n=2; Anopheles gambiae|Rep: ...    32   9.0  

>UniRef50_A3HS11 Cluster: Sensor histidine kinase; n=1; Algoriphagus
           sp. PR1|Rep: Sensor histidine kinase - Algoriphagus sp.
           PR1
          Length = 606

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
 Frame = +2

Query: 224 NLRPFWKIKKANY---NIFLLSMTIYYR*SNTG*YNNINYIRMLLVFWVPLP*WVLSRFL 394
           NL  F+ +K+  Y    +FLL   IYY   +     N  Y   L  FW+      +S+ L
Sbjct: 204 NLILFFNMKERQYIYYGLFLLFQLIYYSRISPYLAANFGYENSLFFFWLT----TVSQIL 259

Query: 395 VSKIFHYIFKRNFLKDILSMPIIDKILSRSCTLLV 499
           ++  F+ +F R+FL+    +P  DK++     LL+
Sbjct: 260 INT-FYLLFIRHFLELQKVLPRFDKVVKGVAILLI 293


>UniRef50_A1ICP6 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
           uncharacterized protein - Candidatus Desulfococcus
           oleovorans Hxd3
          Length = 215

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 191 LKLGWGPWAHKNLRPFWKIKKANYNIFLLSMTIYY 295
           L   WG W HK   P  +     YN F+   TI Y
Sbjct: 66  LHFTWGDWQHKAFEPLGEAHGHGYNTFITDQTILY 100


>UniRef50_Q57U70 Cluster: Arginine N-methyltransferase, putative;
           n=3; Trypanosoma|Rep: Arginine N-methyltransferase,
           putative - Trypanosoma brucei
          Length = 368

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 191 DVPGYEGCEVGSLQPNLLLPEAMDIAMCLPPRCLNHE 81
           DV G +    G ++  + L +A  +  CLPP CL HE
Sbjct: 207 DVDGLDFSRYGRIEYEVYLEQASPLVECLPPLCLLHE 243


>UniRef50_UPI0000E45E11 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 343

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = -2

Query: 290 KWSYSAKKYYNSL-FLFSKRASNSCVPKGPSLV*D-----VPGYEGCEVGSLQPNLLLPE 129
           KW ++  +   S+ F+  K AS SC  +   L+ +      PG++GC   +    +  P 
Sbjct: 185 KWGWNLAQCDESVPFICKKMASKSCYDRKGHLIPEGHTFTPPGHDGCTQCTCLHGV--PN 242

Query: 128 AMDIAMCLPPRCLNHE 81
              IA C PP C   E
Sbjct: 243 ICSIAGCAPPTCSKFE 258


>UniRef50_A1EAG3 Cluster: Serpin 17; n=2; Anopheles gambiae|Rep:
           Serpin 17 - Anopheles gambiae (African malaria mosquito)
          Length = 481

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 29  VHPPNQYIKKDNTSRITTHDLSSVVASTLRYPWPLVTAD*VEENQPHSPHTQGRLKLGW 205
           ++P   Y+ K     I T++      S+LR+P P    +  ++ +P  P T G ++  W
Sbjct: 55  IYPQPVYVPKSQQETIKTYEKIQFEDSSLRFPAP--NQNEQQQPRPQPPKTPGAMQFAW 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,148,243
Number of Sequences: 1657284
Number of extensions: 10054557
Number of successful extensions: 20691
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20689
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)