Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2216
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.53 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 236 FWKIKKANYNIFLLSMTIY 292
           F+KI K  YNI  +S+T Y
Sbjct: 39  FYKIYKYTYNIVAVSLTAY 57


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 145 ICCYQRPWISQC 110
           +C  Q+PW S C
Sbjct: 327 VCIDQQPWRSYC 338


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 254 LFLFSKRASNSCVPKGPSLV*DVP 183
           L LF +    + +PKG   V DVP
Sbjct: 8   LLLFDRPQEPAFMPKGNKEVFDVP 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,360
Number of Sequences: 336
Number of extensions: 2906
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)