Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2216
         (519 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81553-12|CAB04498.3|  803|Caenorhabditis elegans Hypothetical p...    30   0.86 
AL031630-15|CAA20994.1|  244|Caenorhabditis elegans Hypothetical...    29   2.6  
Z75554-2|CAA99954.1|  526|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U64835-2|AAO25998.1|  337|Caenorhabditis elegans Serpentine rece...    27   8.0  
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla...    27   8.0  
AF106574-3|AAC78159.2|  427|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z81553-12|CAB04498.3|  803|Caenorhabditis elegans Hypothetical
           protein F56H6.9 protein.
          Length = 803

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 38  PNQYIKKDNTSRITTHDLSSVVASTLRYPW 127
           P Q  K++N S +   DL+SV+ +   YPW
Sbjct: 481 PKQLAKQNNESYVFQKDLNSVLLAVNNYPW 510


>AL031630-15|CAA20994.1|  244|Caenorhabditis elegans Hypothetical
           protein Y38H6C.16 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 320 NNINYIRMLLVFWVPLP*WVLSRFL 394
           +N  Y+ + L+FW+P   WV+  FL
Sbjct: 185 DNYGYLGITLIFWIPNGVWVVMPFL 209


>Z75554-2|CAA99954.1|  526|Caenorhabditis elegans Hypothetical
           protein ZC455.3 protein.
          Length = 526

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 484 RTAEYFVNNGHRKDILQKISFKNIMEYFAHQKS*KNP 374
           R A+   + GH   + Q I    I +Y+AH+K  KNP
Sbjct: 35  RIADILADAGHNVTLFQPI----IYDYYAHKKIVKNP 67


>U64835-2|AAO25998.1|  337|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 29 protein.
          Length = 337

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +2

Query: 281 MTIYYR*SNTG*YNNINYIRMLLVFWVPL---P*WVLSRFLVSKIFHYIFK 424
           +TIY+  S+T  +   +Y+R +  F VPL   P ++L+ F  S ++  + K
Sbjct: 75  ITIYFLVSDTSFFRLNSYVRPVCEFLVPLLKDPSYILTPFYTSYMYAQLAK 125


>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
           protein 8 protein.
          Length = 1206

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +2

Query: 380 LSRFLVSKIFHYIFKRNFLKDI----LSMPIIDKILSRSCTLL 496
           +S F++SKI  Y F  NFL D     +S+   + I   +C +L
Sbjct: 181 ISAFIISKIHKYYFFFNFLDDRSKVGISLRTTNSIAEATCAML 223


>AF106574-3|AAC78159.2|  427|Caenorhabditis elegans Hypothetical
           protein E02D9.1a protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 188 VPGYEGCEVGSLQPNLLLPEAMD 120
           V GY GCEV S++  L+L E MD
Sbjct: 219 VVGYHGCEVSSIKKELVL-EYMD 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,091,037
Number of Sequences: 27780
Number of extensions: 242114
Number of successful extensions: 465
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)