Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2214
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.2  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -3

Query: 167 NRHYQNIELHMKICSIVLKFKRHVSYTVSLLSYCIAFIAGF 45
           N  Y+N+E    I     +  R   +    LSY I F  GF
Sbjct: 327 NVEYKNVEFWRNIREDYDRLARLTQFLDKELSYLILFSIGF 367


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 290 PVPKSQHQRKNKNN*NTKPHDL 355
           P P   H +  +N   T PHD+
Sbjct: 736 PPPPHPHHQPPRNPVGTNPHDI 757


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 290 PVPKSQHQRKNKNN*NTKPHDL 355
           P P   H +  +N   T PHD+
Sbjct: 628 PPPPHPHHQPPRNPVGTNPHDI 649


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 129 YFHM*LNVLIVSVAVL*QLTDIMWYCYVNTVSGSL 233
           YF   L +  +SV ++  LTDI+W   V   +G++
Sbjct: 61  YFITHLALADLSVGLINVLTDIIWKTTVAWYAGNV 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,284
Number of Sequences: 336
Number of extensions: 2999
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)