Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2213
(637 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0774 - 19457218-19457517,19457575-19457673,19457679-194577... 32 0.33
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.33
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 30 1.3
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 30 1.8
11_06_0284 + 21909758-21913645 28 5.4
06_02_0217 + 13170731-13170826,13170886-13171203 28 5.4
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 28 5.4
02_02_0445 - 10351483-10351606,10351987-10353170 28 5.4
08_01_0605 + 5317079-5318446 28 7.1
07_01_1127 + 10456895-10457388,10457488-10458112 28 7.1
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 28 7.1
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 28 7.1
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 28 7.1
02_05_1033 + 33642479-33642688,33643089-33643343,33643479-336436... 28 7.1
08_02_1323 - 26136015-26137876,26138300-26139229,26139922-261400... 27 9.4
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305... 27 9.4
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 27 9.4
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 27 9.4
>04_03_0774 -
19457218-19457517,19457575-19457673,19457679-19457726,
19458382-19458482,19458807-19458918,19459132-19459515,
19459952-19460128
Length = 406
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Frame = +2
Query: 116 STVHRSNESFSPKVTRHPD-------SARDIVDSQRHADDYDFKKQISTYVDNDDYSETQ 274
ST+ +++ S SP D D DS D+YD + Y +D+Y E
Sbjct: 69 STLSQTSSSLSPSTMGTNDVNYNWYSEGEDTYDSDDEYDEYDSDDEYDEYDSDDEYDEVS 128
Query: 275 SIRNRETNVS 304
S+ N T S
Sbjct: 129 SVNNVYTPTS 138
>01_06_0381 + 28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +2
Query: 65 RSTRSEHRSQ-TRAETKSSTVH---RSNESFSPKVTRHPDSARDIVDSQRHADDYDFKKQ 232
+ +R +HRS+ +RA T H R ++ P+ RH DS+ + D H +
Sbjct: 737 KHSRKKHRSEDSRAHTSDVHKHKLKRHSKDLEPRHHRHRDSSSE--DEHEHRSSKSRHRH 794
Query: 233 ISTYVDNDDYSETQSIRNRETNVSSKIDRNTDD 331
Y ++D S R++ + SS + DD
Sbjct: 795 RDDYHYHEDDEHRSSHRHQRDHRSSSKRKKDDD 827
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 30.3 bits (65), Expect = 1.3
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
E+ E + RS+ S H+ R + R ES D RD D RH D
Sbjct: 302 ESRESERRSSSSRHKDNERRDRSKD---RYKESDKVDSGHERDKTRDDRDRGRHKDLESR 358
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKV-EN 400
K++ D DD S R++ + S R+ R + + ++ + ++ E
Sbjct: 359 KRRNGEAKDRDD-RHKDSTRSKYSTSDSHKHRSRSRERGRDAERRGQRSEELKENTFREE 417
Query: 401 DYSQIQRNEKVDRNL 445
D + Q EK+++ L
Sbjct: 418 DEEEYQ--EKIEQQL 430
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Frame = +2
Query: 65 RSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQ----RHAD---DYDF 223
RS H SQ A S + E+ + + DS RD RHA D +
Sbjct: 177 RSPSRHHSSQDHARHHSRSRDTGAEANGSRASTREDSDRDSNGRNSKHGRHATRSRDNET 236
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
++ S V ++ Y E + ++ + S+ +DR+ D + T R
Sbjct: 237 ERSSSYAVRDEAYDERERYKHERRHRSNPVDRDKVDLHELTHR 279
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 182 DIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRN---RETNVSSKIDRNTDDNYSRTSR 352
DI D+ +HA + + +VD+DD E + + N K DR+T +
Sbjct: 426 DICDAWQHASCVGYSPKEEMHVDDDDGDEASNNEKGTLKSKNRRKKKDRHTRPGSLKVCI 485
Query: 353 YETKVNKTIIDSKVENDYSQI 415
YE N T + S ++D ++I
Sbjct: 486 YEGAKN-TDLTSTQKSDMAEI 505
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/94 (20%), Positives = 35/94 (37%)
Frame = +2
Query: 53 ELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDFKKQ 232
EL+ R + + R E K H E + R + + + ++ + + +
Sbjct: 455 ELKGRKDKEKKEKGGREERKEEEHHEKQEK-EKEEERKEEGQNEEKEGRKEVGEEEKEDD 513
Query: 233 ISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDN 334
Y D+DDY + N E D + DD+
Sbjct: 514 DDDYDDDDDYDDDDYDDNEEEKKYDDDDDDDDDD 547
>06_02_0217 + 13170731-13170826,13170886-13171203
Length = 137
Score = 28.3 bits (60), Expect = 5.4
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +2
Query: 32 RALAENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVD--SQRH 205
R + E L L R + E +Q + E +H++ + R D AR + + +R
Sbjct: 7 RRIRERLLLLERE-KEELPAQQQEEKLPIFIHKTQRVTITERKRIEDVARQLEEVLMKRI 65
Query: 206 ADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIID 385
+QI ++ + I++ E+++ +I+ NTDD ++ YE N+ I
Sbjct: 66 KKRKIETRQIVVEETRNELRINKIIKSEESDI--EIEVNTDDEENKAEEYEAWTNREIAR 123
Query: 386 SKVEND 403
+K + +
Sbjct: 124 TKRDKE 129
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 167 PDSARDIVDSQRHADDYDFKKQISTYVD 250
P SA D D D +DF +STY D
Sbjct: 497 PSSAADFDDEDDEDDKFDFLNDMSTYAD 524
>02_02_0445 - 10351483-10351606,10351987-10353170
Length = 435
Score = 28.3 bits (60), Expect = 5.4
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
E +E + S SE+ +T +E + + + F PK R + R+ ++ + +
Sbjct: 152 EPIEEEEESEESEY--ETDSEDEQTGMAMVKPVFIPKSQRDTIAERERLEEEERQLEELV 209
Query: 224 KKQISTYVDNDDYSETQSIRNRE-----TNVSSKI-DRNTDDNYSRTSRYETKVNKTIID 385
KK++ + IR E N + I D +TDD + YE+ N+ I
Sbjct: 210 KKRLEARKIETRQIVVEEIRKEEHIEKTLNEEANIEDVDTDDELNEAEEYESWKNREIAR 269
Query: 386 SKVENDYSQIQRNEKVDRNL*IVQKPKNST 475
K + + + EK + ++K +N T
Sbjct: 270 IKRDREERDARLKEKEE-----IEKVRNMT 294
>08_01_0605 + 5317079-5318446
Length = 455
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 289 PISNALGLRIVVIVDVCRYLFLEIVIVGVSLGVD 188
P NALG+R + + V R L L + +GV L D
Sbjct: 352 PKDNALGIRTITGIIVARLLILPCIGIGVVLLAD 385
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 254 DDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVENDYSQIQRNEK 430
DD + + +N SK D N D NY T +K + I + +ND Q + K
Sbjct: 255 DDSINDGTQNDNPSNCDSKKDSNGDSNYGTTDANVSKDFQPPIPTPSQNDRPQTDSSAK 313
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 212 DYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSK 391
DYDF+++ +T DND ++ E N I ++ S +++KVN +++
Sbjct: 65 DYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKD------GKSDWKSKVNSPPVEAA 118
Query: 392 VE 397
+E
Sbjct: 119 IE 120
>03_03_0008 -
13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVENDYSQI 415
S +DN + S N++ N ++K+D D S+ ET+ S
Sbjct: 234 SAGIDNQPGTPGTSNNNKKLNYTTKVDSTCDSETSQNGALETQFKSHDASSIPMKKSVIF 293
Query: 416 QRNEKVDRNL 445
+R K RN+
Sbjct: 294 KRKRKPSRNI 303
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 251 NDDYSETQSIRNRETNVSSKIDRNTDDNYSRTS-----RYETKVNKTIIDSKVENDYSQI 415
+DD + + + N +T++ SKI + +N + + E + ++ +VEN Q+
Sbjct: 604 SDDETLIEKLENNKTDLQSKITKEVKENSILQASLGRRKEELHERRLALEKEVENLRDQL 663
Query: 416 QRNEKVDRNL 445
Q+ K+ +L
Sbjct: 664 QKERKLRASL 673
>02_05_1033 +
33642479-33642688,33643089-33643343,33643479-33643603,
33643827-33643908,33644008-33644076,33644102-33644341,
33644431-33644496,33645087-33645155,33645229-33645366,
33645681-33645754,33646146-33646255,33646428-33646525,
33646595-33646633,33646771-33646890,33646984-33647109,
33647321-33647382,33647467-33647518,33648182-33648436
Length = 729
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 195 PRDTPTITISRNKYLHTSTMTTIRRPKAL 281
P+ +PT T+S Y+HT+ + I P +L
Sbjct: 681 PQTSPTSTLSYKLYVHTAEASVIGEPTSL 709
>08_02_1323 - 26136015-26137876,26138300-26139229,26139922-26140068,
26140139-26140360,26140513-26140555
Length = 1067
Score = 27.5 bits (58), Expect = 9.4
Identities = 33/148 (22%), Positives = 58/148 (39%), Gaps = 2/148 (1%)
Frame = +2
Query: 41 AENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRH--PDSARDIVDSQRHADD 214
A+N+E +SE + +SST+H ++ + S K D A +D R ADD
Sbjct: 824 ADNVE---EEVQSEDIATDPTSHESSTLHITDGAESKKQDAKVAADLAAGKIDVPRSADD 880
Query: 215 YDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKV 394
+ +K +T +DD E+N ID D + + KT
Sbjct: 881 AEEQKHEATVSTDDDLKGDDP---SESNSPQIIDGAGDKEQDAETAADPPPGKTDAPPST 937
Query: 395 ENDYSQIQRNEKVDRNL*IVQKPKNSTR 478
++ + E+++ +V PK +
Sbjct: 938 DDAEETKPKEEELETVGTVVDDPKEEDK 965
>02_01_0417 -
3048519-3048710,3048903-3050600,3050622-3050909,
3052308-3052377,3052417-3052668,3053235-3055297
Length = 1520
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 606 HVNRSNKSITFTVNFCDTASSLRNVVIKG*FVNSC 502
H +RSNK+ F +NF D A L I VNSC
Sbjct: 4 HSSRSNKTSRFRINFFDPAFVLLLTFISP--VNSC 36
>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 50 LELQCRSTRSEHRSQTRAETKSS-TVHRSNESFSPKVTRHPDS 175
+++QC R S AET + T+H+ FS K R PDS
Sbjct: 1192 IQMQCNLHRVSE-SAVSAETDNEVTLHQPKGKFSSKRAREPDS 1233
>01_05_0199 - 19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/82 (24%), Positives = 37/82 (45%)
Frame = +2
Query: 86 RSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYS 265
+ + R + K R + + V+ D D S+RH+ D K + T+ + D S
Sbjct: 808 KDKKREKDKEKKHKRHHHDTADDVSSERDEKDDSKKSRRHSSDRK-KSRKHTHASDSD-S 865
Query: 266 ETQSIRNRETNVSSKIDRNTDD 331
E + R+++ SS+ + DD
Sbjct: 866 ENRHKRHKKDRDSSRRNGTRDD 887
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,656,485
Number of Sequences: 37544
Number of extensions: 266460
Number of successful extensions: 842
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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