Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2213
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       30   0.053
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.6  

>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 0.053
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 466 EFDQDIDYDNNKTTVDKSTFDDDV 537
           EFD D+ +D++    D S FDDDV
Sbjct: 91  EFDDDLPFDDDSDFDDDSDFDDDV 114


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -1

Query: 373 LVHFSLVTRSSRIIVIGVSVNFTANIRFPISNALGLRI 260
           L+H + +  +    V+ ++  F A++R  I NAL ++I
Sbjct: 287 LLHKAFIVENQPPQVMKMNTRFCASVRLLIDNALIMKI 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,327
Number of Sequences: 2352
Number of extensions: 11692
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)