Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2213
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 34 0.074
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 34 0.074
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 33 0.17
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 33 0.17
U64599-8|AAZ91356.1| 226|Caenorhabditis elegans Regulator of g ... 33 0.23
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 33 0.23
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 33 0.23
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 33 0.23
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 31 0.91
AC006634-1|AAF39796.1| 231|Caenorhabditis elegans Hypothetical ... 30 1.6
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin recep... 29 2.1
AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal daue... 29 2.1
Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 29 2.8
AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical ... 29 2.8
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 29 3.7
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 29 3.7
U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical pr... 29 3.7
AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative telo... 29 3.7
AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein. 29 3.7
AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock (biolog... 29 3.7
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 4.9
Z70780-9|CAA94826.1| 127|Caenorhabditis elegans Hypothetical pr... 28 4.9
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 4.9
AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical p... 28 6.4
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 28 6.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 8.5
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 27 8.5
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 27 8.5
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 8.5
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF025454-8|AAK68370.1| 334|Caenorhabditis elegans Serpentine re... 27 8.5
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 37.1 bits (82), Expect = 0.011
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +2
Query: 161 RHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSI---RNRETNVSSKIDRNTDD 331
R PD RD + D K + +D+D E + I R R + KI+ +T++
Sbjct: 197 RSPDRRRDSDRKREDGKRKDESKDVEWNLDSDSDDEQKKIEAARKRRIQIIKKIEGHTEE 256
Query: 332 NYSRTSRYETKVNKTIIDSKVE--NDYSQIQRNEKVDRNL*IVQKPKNSTRIST 487
N R S T + TI D K + D S +++ DR L + STR +
Sbjct: 257 NTPRDS--STPRSDTIGDKKTDESEDSSSDSEDDEDDRKLAEAKDLIKSTRFGS 308
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.074
Identities = 28/103 (27%), Positives = 44/103 (42%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
E+ E + TR +R R+ + ++F P+ R P R R DDY+
Sbjct: 289 EDYEEEESKTRKTNR---RSRNDDDDILDDEDNFKPR--RKPYGGRS-AHRNREEDDYE- 341
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
D++DY E S + R+TN S+ID + +T R
Sbjct: 342 --------DDEDYEEDNSFKPRKTNRRSRIDDEDESKPRKTQR 376
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 34.3 bits (75), Expect = 0.074
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 23 QGSRALAENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQR 202
+G A ++ + + R RS R Q E + HR +E+ + R DS++
Sbjct: 105 RGPDARQKDRDFKGRQERSG-RDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSERDSEK 163
Query: 203 HADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKI-DRNTDDNYSR 343
H D K+ ST ++D S + ++ + +K+ DR D NY +
Sbjct: 164 HKRHIDRHKKSSTTSPDNDKSPHKKSKHTDVPADAKLFDRILDPNYKK 211
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.17
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 41 AENLELQCRS---TRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHAD 211
AE L + RS +R E R +R+ ++S+ S+ F + RH R DS ++
Sbjct: 229 AERLRRKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSE 288
Query: 212 DYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTI 379
+ + + S N D E Q R + + ++ + T + SR TK K +
Sbjct: 289 S-EHETRSSHRRRNSDDDERQDPRKKSYGL-VEMRKRTAEEREEESRAPTKEYKLV 342
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 33.1 bits (72), Expect = 0.17
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 41 AENLELQCRS---TRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHAD 211
AE L + RS +R E R +R+ ++S+ S+ F + RH R DS ++
Sbjct: 229 AERLRRKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSE 288
Query: 212 DYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTI 379
+ + + S N D E Q R + + ++ + T + SR TK K +
Sbjct: 289 S-EHETRSSHRRRNSDDDERQDPRKKSYGL-VEMRKRTAEEREEESRAPTKEYKLV 342
>U64599-8|AAZ91356.1| 226|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform d protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 194 SQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDD 331
S AD+YD + IS+ D+DD+S ++S ++T S+ T D
Sbjct: 2 SDEDADEYDDQSSISSVSDDDDFSGSESESYQDTTESTGPSEATTD 47
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 194 SQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDD 331
S AD+YD + IS+ D+DD+S ++S ++T S+ T D
Sbjct: 2 SDEDADEYDDQSSISSVSDDDDFSGSESESYQDTTESTGPSEATTD 47
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 3/91 (3%)
Frame = +2
Query: 74 RSEHRSQTRAETKSSTVHRSNESFSPKVTRHPD---SARDIVDSQRHADDYDFKKQISTY 244
+ EHR + R E KS ++ SPK +H D S+ +H D K + +
Sbjct: 1115 KKEHRDKGRKEEKSHKHRSDDDDSSPKKKKHRDSDESSEKKKKKHKHDSDSALKLREGSP 1174
Query: 245 VDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
+ D IR + S + N D N+
Sbjct: 1175 LSVDKEKSPMKIRIGQGQPSISLAANEDKNH 1205
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 194 SQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDD 331
S AD+YD + IS+ D+DD+S ++S ++T S+ T D
Sbjct: 2 SDEDADEYDDQSSISSVSDDDDFSGSESESYQDTTESTGPSEATTD 47
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 30.7 bits (66), Expect = 0.91
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 32 RALAENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHAD 211
+ +AE LE Q R ++ + E + + E F KV + +S + V++
Sbjct: 52 KKVAEQLE-QHRIREEAELAKRKTENQKKEFRKRQEIFE-KVFQDAESGQKAVENVM--S 107
Query: 212 DYDFKK---QISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTII 382
DY + ++ Y D++D+ +TQ I N + R+++ + S+ E+++ KT
Sbjct: 108 DYRESRNAIKVQLYTDSNDFIQTQQIEKSHFNAAGDRLRSSE---IQLSKLESELKKT-- 162
Query: 383 DSKVENDYSQ 412
++ +Y Q
Sbjct: 163 -KQIREEYYQ 171
>AC006634-1|AAF39796.1| 231|Caenorhabditis elegans Hypothetical
protein F35F11.3 protein.
Length = 231
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = -1
Query: 436 VNFLV-TLNLGIVIFNFRINNRLVHFSLVTRSSRIIVIGVSVNFTANIRFPISNALGLRI 260
+NFL L +GIV+F+F +L F +++ + ++ V +N +R S L I
Sbjct: 2 INFLKHLLQIGIVVFSFFKLKKLTRFIVISDCYSLDLLNV-INRHEILR--TSEGLMPHI 58
Query: 259 VVIVDVCRYLFLEIVIVGVSLGVD----YITSAVRVASNL 152
V V+V +L L ++ G+D +IT V + +NL
Sbjct: 59 VPRVEVFDFLILIDALLQQDRGIDTDRNFITENVDLVANL 98
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 152 KVTRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDD 331
+ T H I S + + D ++ + Y DND + I+N N KI + DD
Sbjct: 622 RTTTHYQHLLSICASYKKSIDSKLEELANVYTDNDPRCLLEGIQNSVENFEVKIHQKVDD 681
>AF012437-1|AAC47715.1| 1846|Caenorhabditis elegans insulin receptor
homolog protein.
Length = 1846
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/103 (22%), Positives = 40/103 (38%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
ENL C ST S + T + + + S + T H DIVD H D++
Sbjct: 22 ENLGPSCSSTTSTTAATEALGTTTEDMRLKQQRSSSRATEH-----DIVDGNHHDDEHIT 76
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
+++ ++ T + + + + T NYS S+
Sbjct: 77 MRRLRLVKNSRTRRRTTPDSSMDCYEENPPSQKTSINYSWISK 119
>AC084196-6|AAK29947.2| 1843|Caenorhabditis elegans Abnormal dauer
formation protein 2 protein.
Length = 1843
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/103 (22%), Positives = 40/103 (38%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
ENL C ST S + T + + + S + T H DIVD H D++
Sbjct: 19 ENLGPSCSSTTSTTAATEALGTTTEDMRLKQQRSSSRATEH-----DIVDGNHHDDEHIT 73
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
+++ ++ T + + + + T NYS S+
Sbjct: 74 MRRLRLVKNSRTRRRTTPDSSMDCYEENPPSQKTSINYSWISK 116
>Z11126-3|CAA77474.2| 487|Caenorhabditis elegans Hypothetical
protein ZK643.5 protein.
Length = 487
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 170 DSARDIVDSQRHADDYDFKKQISTYVD-NDDYSETQSIRNRETNVSSKIDRNTDDNYSRT 346
+S D++ S D D + D N+D + + + + + + + +D RT
Sbjct: 42 ESTDDLLGSSEPFDQEDILDTVPEQTDENEDEAGDDELESEKEELDYDEEEDDEDRRERT 101
Query: 347 SRYETKVNKTIIDSKVENDYSQIQRNE 427
SRY ++ + DS VE D ++ + +
Sbjct: 102 SRYTSEKKGSRKDS-VEGDENKKENGQ 127
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Frame = +2
Query: 14 QTGQGSRALAENLELQCRSTRSEHRSQTRAETKSSTVHRSNE--SFSPKVTRHPDSARDI 187
+T + S+ E + + +T+ E ++T S E S SP+ + P S+
Sbjct: 226 KTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSESPETSEEPQSSEST 285
Query: 188 VDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKV 367
S+ + K + D D + + K D DD+ ++ +
Sbjct: 286 PTSEESTEQSTEKPKKEDKKDKKDKKDKKQ---------KKEDSEEDDDDKKSKSSSSSD 336
Query: 368 NKTIIDSKVENDYSQIQRNEK 430
+KT S E+D S +EK
Sbjct: 337 SKTDEKSTSESDSSSEASSEK 357
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 173 SARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
+A+ + +QRH DD D + ST + DDY + +++S+++R T D + +T
Sbjct: 529 AAKLLYQAQRHNDDIDNLSKDSTEMRLDDYETILA------DLNSRLERVTRDIHEKTDF 582
Query: 353 YET 361
+ T
Sbjct: 583 HAT 585
>AC092690-2|AAK73855.2| 745|Caenorhabditis elegans Hypothetical
protein BE0003N10.1 protein.
Length = 745
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/90 (18%), Positives = 40/90 (44%)
Frame = +2
Query: 146 SPKVTRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNT 325
SP HPDS ++ SQR + + + N ++ T+S+ RE + +++
Sbjct: 377 SPAAAFHPDSVAQLLGSQR-KKSFMLHYEFPGFAIN-EFGTTRSLNRREIGHGALAEKSL 434
Query: 326 DDNYSRTSRYETKVNKTIIDSKVENDYSQI 415
+ + Y T++ +++S + + +
Sbjct: 435 KNLFPADFPYATRLACQVLESNGSSSMASV 464
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/132 (18%), Positives = 52/132 (39%)
Frame = +2
Query: 44 ENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDF 223
ENLE + + R + + +S + RS + +PK +++ + +
Sbjct: 99 ENLEKKLKKDDGSSREKVEDQEQSRKIDRSIKDRNPKSLEQKSHQKNVGEGSKRTSS-SR 157
Query: 224 KKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVEND 403
K + DD + +S + + + S + + + R+S + K + S +N
Sbjct: 158 KPEEPERSRRDDRNRLRSEKTAQGS-SKSLRKQVSNRSKRSSSDREEREKPKMISSTKNI 216
Query: 404 YSQIQRNEKVDR 439
S+ NEK R
Sbjct: 217 KSKESSNEKSQR 228
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 113 SSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRE 292
S + SNE+ ++R +S R + S+R ++ DFK Q+S + N+ +Q + N
Sbjct: 512 SHDTNASNETDIRSMSRELESLRSEISSRRSQEE-DFKLQVSMHESNET-RLSQQLSNMR 569
Query: 293 TNVS------SKIDRNTDDNYSRTSRYETK 364
V S I+R+ + + + + E K
Sbjct: 570 LKVEQMEIKCSSIERHRESDKHQLEQAERK 599
>U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical
protein F25B4.5 protein.
Length = 710
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETK 364
S+ D DDY + S R RE + + DR+ D + R R ++
Sbjct: 6 SSSSDTDDYYRSSSSRKREDSHRRRDDRHRDSDRDRDRRRRSR 48
>AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative
telomere binding protein protein.
Length = 877
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDD-NYSRTSRYETKVNKTIIDSKVENDYS- 409
ST D++ ET + ++ + + N ++ S T N +DS + D+
Sbjct: 453 STVKDSERVRETANEITKDDSGEEFEETNAQRLQNNKDSAAITSKNNLRLDSDDDEDFPD 512
Query: 410 -QIQRNEKVDRNL*IVQKPKN 469
Q+ +EK+ +NL I ++PKN
Sbjct: 513 YQVNESEKIFKNLEIGEEPKN 533
>AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein.
Length = 877
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDD-NYSRTSRYETKVNKTIIDSKVENDYS- 409
ST D++ ET + ++ + + N ++ S T N +DS + D+
Sbjct: 453 STVKDSERVRETANEITKDDSGEEFEETNAQRLQNNKDSAAITSKNNLRLDSDDDEDFPD 512
Query: 410 -QIQRNEKVDRNL*IVQKPKN 469
Q+ +EK+ +NL I ++PKN
Sbjct: 513 YQVNESEKIFKNLEIGEEPKN 533
>AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock
(biological timing) abnormalityprotein 2 protein.
Length = 877
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDD-NYSRTSRYETKVNKTIIDSKVENDYS- 409
ST D++ ET + ++ + + N ++ S T N +DS + D+
Sbjct: 453 STVKDSERVRETANEITKDDSGEEFEETNAQRLQNNKDSAAITSKNNLRLDSDDDEDFPD 512
Query: 410 -QIQRNEKVDRNL*IVQKPKN 469
Q+ +EK+ +NL I ++PKN
Sbjct: 513 YQVNESEKIFKNLEIGEEPKN 533
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +2
Query: 158 TRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
T H + + H D + IST V D +S R S D N D+N
Sbjct: 2168 TMHSQLVKTFAEEHTHLRDASRHRAIST-VTLDSSGSGRSTRCEIFEDSPSEDEN-DENQ 2225
Query: 338 SRTSRYETKVNKTIIDS 388
T+R K++ I+DS
Sbjct: 2226 LDTTRIGRKIDPIIVDS 2242
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +2
Query: 158 TRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
T H + + H D + IST V D +S R S D N D+N
Sbjct: 2168 TMHSQLVKTFAEEHTHLRDASRHRAIST-VTLDSSGSGRSTRCEIFEDSPSEDEN-DENQ 2225
Query: 338 SRTSRYETKVNKTIIDS 388
T+R K++ I+DS
Sbjct: 2226 LDTTRIGRKIDPIIVDS 2242
>Z70780-9|CAA94826.1| 127|Caenorhabditis elegans Hypothetical
protein F46B6.10 protein.
Length = 127
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 236 STYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNK------TIIDSKVE 397
S VD DD T++ R SSK +TDD + ++ K +K +I+ E
Sbjct: 51 SRIVDRDDRGSTKTKGGRRGVKSSKEPDSTDDAFKEMAKRLAKKDKPEKTGDSIVGDDDE 110
Query: 398 NDYSQIQRNEK 430
N +Q Q E+
Sbjct: 111 NPLAQFQMPER 121
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 4.9
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Frame = +2
Query: 17 TGQGSRALAENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDS 196
+G SRA ++ + T S+ + S + RSN + SP +R SA ++
Sbjct: 62 SGADSRASNDSSASRLPDTALVGLSEAEKQHIMSVMSRSNRNTSPMTSRRCSSALQMLPE 121
Query: 197 QRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKT 376
+ + + K+ I T ++ +E+++ + + +I SRT ++V+
Sbjct: 122 VDNLSEAE-KEHIQTILEK---AESKTPFMIKVPMKKQIS-------SRTESTNSRVSSE 170
Query: 377 IIDSKVENDYSQIQRNEKVDRNL*IVQK----PKNSTRI 481
ID +VEN ++QR + ++ + + P+N+ R+
Sbjct: 171 GIDEEVEN---EVQRKKTIEEPIVEIPSRAVTPRNNLRV 206
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 62 CRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRHADDYDFKKQI 235
CR + R+ RAE + + E K T+ P+ A + S+ +D +K++
Sbjct: 651 CRQQLEDERADRRAEEERKDLESKQEQLELKETKVPEEAENQQSSRELHEDLWARKEL 708
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = +2
Query: 158 TRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
T H + + H D + IST V D +S R S D N D+N
Sbjct: 2168 TMHSQLVKTFAEEHTHLRDASRHRAIST-VTLDSSGSGRSTRCEIFEDSPSEDEN-DENQ 2225
Query: 338 SRTSRYETKVNKTIIDS 388
T+R K++ I+DS
Sbjct: 2226 LDTTRIGRKIDPIIVDS 2242
>AF016677-2|AAB66146.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.5 protein.
Length = 292
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 104 ETKSSTVHRSNESFSPKVTRHPDSARDIVDSQRH-----ADDYDFKKQISTYVDNDDY 262
+TK++ V +S+E+ PK HP + + V +++ +Y+++K + + +DY
Sbjct: 72 QTKTTDVEKSSENCPPKCKEHPSNLAEFVCIKKNFFLIDFQNYEWQKLSNCHFLTEDY 129
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +2
Query: 80 EHRSQTRAETKSSTVHRSNESFSPKV-TRHPDSARDIV-----DSQRHADDYDFKKQIST 241
+ R + R + + + S++ +PK + D RD D +R DDY+ +K
Sbjct: 920 QDRKKERKRDRETEAYDSDKLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKSKRK 979
Query: 242 YVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVENDYS 409
D D+ E Q RE V + +++ + + K K++ + + D S
Sbjct: 980 ESDRDNEKEKQ----REKEVEKEHEKDRKEKRKIVEKESEKPRKSVHERMQKADSS 1031
>Z73972-9|CAB60280.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/80 (21%), Positives = 37/80 (46%)
Frame = +2
Query: 158 TRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
T+ D+ ++++D F+ + S Y Y S + + +++ D+ +D NY
Sbjct: 186 TKSEDTLKNLLDDFETFGTDPFRGKNSAY--GKFYQVALSTDDNKLQLANVYDKFSDKNY 243
Query: 338 SRTSRYETKVNKTIIDSKVE 397
T T N+T+ + K++
Sbjct: 244 VATMNQYTFFNQTVGEKKID 263
>Z71177-10|CAB60279.2| 353|Caenorhabditis elegans Hypothetical
protein F15H10.8 protein.
Length = 353
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/80 (21%), Positives = 37/80 (46%)
Frame = +2
Query: 158 TRHPDSARDIVDSQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNY 337
T+ D+ ++++D F+ + S Y Y S + + +++ D+ +D NY
Sbjct: 186 TKSEDTLKNLLDDFETFGTDPFRGKNSAY--GKFYQVALSTDDNKLQLANVYDKFSDKNY 243
Query: 338 SRTSRYETKVNKTIIDSKVE 397
T T N+T+ + K++
Sbjct: 244 VATMNQYTFFNQTVGEKKID 263
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = -1
Query: 427 LVTLNLGIVIFNFRINNRLVHFSLVTRSSRIIVIGVSVNFTANIRFPISNALGLRIVVIV 248
++ +N ++F+F ++ + ++ S+ +I+IG+ V+ T R ++ L I VIV
Sbjct: 156 VLNVNFNQLLFSFPFYIYVIFYVAMSVSNVVILIGILVSCTKYTREKLAIRCRLFIFVIV 215
Query: 247 DVCRYLFLEIVIV 209
LF ++ +
Sbjct: 216 SSPPVLFNTVITI 228
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 59 QCRSTRSEHRSQTRAE--TKSSTVHRSNESFSPKVTRHPD-SARDIVDSQRH 205
Q T+ + R + RAE T S T R + S SP + H +RD D + H
Sbjct: 251 QAEETKRKERREKRAEAATTSDTERRRHRSRSPHRSSHDSRDSRDSRDRREH 302
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Frame = +2
Query: 23 QGSRAL-AENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQ 199
Q S+ L AE + R ++S+ +S KS+T + S + S R D +
Sbjct: 492 QKSQTLQAETKKRVARRSKSKSKSPAPQAKKSTTSESGRQEASEVEHKRSSSVRPDPDEE 551
Query: 200 RHADDY---------DFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
D+ + ++++ V D ++SI + K R TDD + S
Sbjct: 552 SQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISELPSFAGGKPRRKTDDKPKKVSI 611
Query: 353 YETKVNKTIID 385
NK+ D
Sbjct: 612 APVSTNKSSDD 622
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 8.5
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Frame = +2
Query: 23 QGSRAL-AENLELQCRSTRSEHRSQTRAETKSSTVHRSNESFSPKVTRHPDSARDIVDSQ 199
Q S+ L AE + R ++S+ +S KS+T + S + S R D +
Sbjct: 492 QKSQTLQAETKKRVARRSKSKSKSPAPQAKKSTTSESGRQEASEVEHKRSSSVRPDPDEE 551
Query: 200 RHADDY---------DFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSR 352
D+ + ++++ V D ++SI + K R TDD + S
Sbjct: 552 SQLDEIPSSGLTIPEERRRELLGQVGESDDEVSESISELPSFAGGKPRRKTDDKPKKVSI 611
Query: 353 YETKVNKTIID 385
NK+ D
Sbjct: 612 APVSTNKSSDD 622
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 77 SEHRSQTRAETKSSTVHRSNESFSPK--VTRHPDSARD 184
SEH S T T++ T N SFSP+ T S RD
Sbjct: 47 SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRD 84
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 77 SEHRSQTRAETKSSTVHRSNESFSPK--VTRHPDSARD 184
SEH S T T++ T N SFSP+ T S RD
Sbjct: 47 SEHHSPTDQRTETPTSDSGNASFSPENVATSFESSDRD 84
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 251 NDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVENDYSQIQRNEK 430
NDD + S + VSS DRN D+ R R V + + D+ Q+Q
Sbjct: 36 NDDSHSSDSRPTSDNEVSSSSDRNNDEPSVRRKR--KSVENMCHEREHHGDHLQMQVASV 93
Query: 431 VDRNL 445
+ NL
Sbjct: 94 IASNL 98
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 251 NDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNKTIIDSKVENDYSQIQRNEK 430
NDD + S + VSS DRN D+ R R V + + D+ Q+Q
Sbjct: 87 NDDSHSSDSRPTSDNEVSSSSDRNNDEPSVRRKR--KSVENMCHEREHHGDHLQMQVASV 144
Query: 431 VDRNL 445
+ NL
Sbjct: 145 IASNL 149
>AF025454-8|AAK68370.1| 334|Caenorhabditis elegans Serpentine
receptor, class i protein62 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 421 TLNLGIVIFNFRINNRLVHFSLVTRSSRIIVIGVSV 314
+ N+ +++F F + V FSL+ R RI IGVSV
Sbjct: 286 SFNVTVLVFTFPPYRKYV-FSLIKREKRIERIGVSV 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,264,141
Number of Sequences: 27780
Number of extensions: 261560
Number of successful extensions: 1170
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -